Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03970 ATGTCGCTTAAGAGACGCCCCGATGACGGGAAGAGTCCAGAAGACAAACGAAGAAAGCCTCCTCCTTTCTCCAGTGTGGTGCGTGAGGTGATGAAGTTACAAACACTCAGGCATTGGATGGAGCCAATTCTAGAGCCCTTGGTTCGTCGAGTGGTCAAGGAGGAAGTTGAATTGGCCTTGAGGAAGCATTTAGCCAGCATGAAACAGACCAGTGGGAAGGAGTTGAATACTACCGAATCAAGAAGTTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTTCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGGATAAGTTTAGTTGATGCCCTAACAGGCAAGGTTGTTAGTACTGGACCTGAATCTTTGGCTAAGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAGGTGACATTTGGACGCCTGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTCCTTACAGGAGATGTAATTATATATCTTAAAGATGGGATTGGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGAAGGTTCAGGCTTGGGGCAAGAGTTTTGGACAACTTTGAAGGTATCAAAATACGGGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCATCCTCCTAGTCTGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGACTAGGGAAAAGATCCTTACTGTTAAAGATTTTCTTACACTTCTCAATCTGGATCCGGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACAGTGGAGCATGCTCGAACTTGTGTGCTTGATACGACGAGGTACCTGTACTTCCCTGCTCAGTTTCAACAACCTGGTGTGGTCTTCAATTCCGTGGGACAAGTGACAGGACTGCTCTCTGAATGCGAGTATGTCCTTGTAGATAAGCTGTCCGAAACTGAAAAGGCTGATGCTCAAAACTCAGTTATCTCTGCACTTAACCAAGGGGATTATACCACTTTTGAAGATGAATCCTCCCTCATGGAAGGCTCTTCACACTTAACTAATATACATTACTCCCCAAGCTCTCCCAGGACTGAGGGATCAAGTGCCAACAAGCTTTTGGCTCCTCAAAAGACTGGAGGATTCAATTACACACAAGCAAGTGCCTCTTCTCCAGATATCATGTCATCTATTTATTCTGTTGGTGGAACTAGTGGCTTGGATGACTATGGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCAGACTCTTGGTTTTCCAGTCCAAGTTTCCAACTCTTTGATCTGTGACACTGATTCAATAGTTCATGCTTTTAATGATGAAGATCATTTGCAATTTTTTGATACTGATCTTCAATCTCAGTGCCACATTCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGTTGACACGTTCTACAACCATGACCAATGGTAAAGCTCAGAGGAGATGGAGAAAGCTATTCAACGTTCTAAAATGGTTCATGGTGAGTAAACGAGGAAACCAAAGATACAGGTTGTGA 1647 0.4372 MSLKRRPDDGKSPEDKRRKPPPFSSVVREVMKLQTLRHWMEPILEPLVRRVVKEEVELALRKHLASMKQTSGKELNTTESRSLQLQFENSISLPVFTGARIEGEDGSNLRISLVDALTGKVVSTGPESLAKVEIVVLEGDFEEEGDIWTPEEFKSNIVREREGKKPLLTGDVIIYLKDGIGMVGEISYTDNSSWTRSRRFRLGARVLDNFEGIKIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLTREKILTVKDFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRYLYFPAQFQQPGVVFNSVGQVTGLLSECEYVLVDKLSETEKADAQNSVISALNQGDYTTFEDESSLMEGSSHLTNIHYSPSSPRTEGSSANKLLAPQKTGGFNYTQASASSPDIMSSIYSVGGTSGLDDYGLPNFDSMGLRYDQTLGFPVQVSNSLICDTDSIVHAFNDEDHLQFFDTDLQSQCHIQADLQSAVDSFMLTRSTTMTNGKAQRRWRKLFNVLKWFMVSKRGNQRYRL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03970 548 Pfam Calmodulin binding protein C-terminal domain 312 366 IPR046829 -
Rops2g03970 548 MobiDBLite consensus disorder prediction 1 23 - -
Rops2g03970 548 MobiDBLite consensus disorder prediction 1 25 - -
Rops2g03970 548 PANTHER OS02G0177800 PROTEIN 12 439 IPR012416 GO:0005516
Rops2g03970 548 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Rops2g03970 548 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03970 Rops-Chr2 72657055 72662407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03970 1 354 Calmodulin-binding Proteins AT5G62570 61.773 2.35e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03970 - - gmx:100793156 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03970 2 72657055 72662407 Rops2g03970 2 72657055 72662407 ECH