Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03958 ATGGCTACCGCCGGCGATGTTTTCCGGCAGAATTTGACCGAAGTGCTCAAGGAGGCACCTTCTGGTGCCGGAGAACTACACGTTCTTGCTGTTGATGACAGCCTTGTCGATCGCAAGTTCATTGAACGCTTGCTGAAGATTTCTTCTTGTAAAGTGACGGTGGTGGAAAGTGGAACACGAGCTCTTCAGTATTTGGGGTTGGACGGAGAGAACAGTTCTCTTGGGTTTGATGGTGTGAAGGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAACTACTCAAGAAAGTAAAGCAGGAGTCTTCTGTTTTTAGAGAGATTCCAGTGGTGATCATGTCATCCGAGAATATCTTGACTCGAATTGATAGGTGTTTAGAGGGAGGAGCTGAGGATTTTCTGTTGAAGCCAGTCAAGTTATCAGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGTGAAGTGAAGGAAGGAGAGAAAAGTCCTCACAAAAGAAGGCGATTAGATGATTGCAAACCATCTCTATCAACTACATTCTCACCAATTTCTCATCCATGTGATCCGTCACCACTATCACCATCCACAAAGAAGTCTAGATTGTGA 615 0.439 MATAGDVFRQNLTEVLKEAPSGAGELHVLAVDDSLVDRKFIERLLKISSCKVTVVESGTRALQYLGLDGENSSLGFDGVKVNLIMTDYSMPGMTGYELLKKVKQESSVFREIPVVIMSSENILTRIDRCLEGGAEDFLLKPVKLSDVRRLKDFIMKGEVKEGEKSPHKRRRLDDCKPSLSTTFSPISHPCDPSPLSPSTKKSRL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03958 204 SMART REC_2 26 151 IPR001789 GO:0000160
Rops2g03958 204 SUPERFAMILY CheY-like 25 150 IPR011006 -
Rops2g03958 204 MobiDBLite consensus disorder prediction 177 204 - -
Rops2g03958 204 CDD REC_typeA_ARR 28 150 - -
Rops2g03958 204 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Rops2g03958 204 Gene3D - 26 182 - -
Rops2g03958 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 187 IPR045279 GO:0009736
Rops2g03958 204 MobiDBLite consensus disorder prediction 160 176 - -
Rops2g03958 204 MobiDBLite consensus disorder prediction 160 204 - -
Rops2g03958 204 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03958 Rops-Chr2 72446930 72449071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03958 5 169 Response Regulator Gene Family AT3G48100 70.833 9.28e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops2g03958 Response_reg 8.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03958 K14492 - gmx:100796843 324.709