Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03952 ATGGTTTCGATATCTGAGACGAAGAAAAGCCTTCACTCTCTGATAGCCTCTAACCTCAGCAAGCTCATCATTCCTTCTTCTTCCAACGACCCCAACCAATCCCCATCCATTAGCAGCCCCCACGTCATCCACAGTAGGTCCCACTCCTTTGTCGGTCCCTCGCCCCTCTTCGCCCCCTCCTCCACTTCCCTCCTCCCCTTTCTCCCCGAACTCAGCGACGACGAAAAAGAACAGAAAAAACTGGACCCCAAAATTGGCCCCGGTGATTTCCAGATTTTGACATTTGTTGGACAGGGTGCCTTTGGGAAGGTCTTTATGGTTAAGAAAAAAGGGGATTGTTCCGACGGTGACGGTGACGGTGACGGTATCTTCGCGATGAAGGTAATGAGGAAGGACACCATCATTAAAAAGAATCACGTGGATTATATGAAAGCTGAGAGAGATATTCTTACCAAAGTTATTCATCCTTTCATTGTTCAGCTCCGTTACTCTTTCCAGACCAAATCTAAGTTATATTTGATTTTGGACTTCGTAAATGGAGGTCATCTCTTCTTCCACCTATATCGCCAGGGTATTTTTAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTCTCTGCTGTTTCACATCTTCACAAGAACGGCATCGTGCATCGCGATCTTAAACCTGAAAACATACTCATGGATGCTCATGGCCATGTGATGTTAACTGATTTTGGATTGTCAATAGAACTTGAGGAATCTGGTAGATCCAACTCTCTGTGTGGGACCACTGAATATATGGCTCCAGAAATCCTTCTAGGTAAAGGCCATAACAAGGACGCAGATTGGTGGAGTGTAGGTATTCTCTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACAGAAAGAAGCTTCAGGAGAAAATTATTAAAGAGAAACTTAAACTTCCACCACGCCTTACCACCGAAGCTCACTCTTTGCTCAAAGGATTTCTGCAAAAGGATCCATCAACAAGATTAGGCAGTGGGCCAAATGGAGATGAGCAGATCAAAAGCCATAAATGGTTTCGGTCAATCAATTGGAAGAAATTGGAGGCAAGAGAACTGCAACCAAAGTTTAAACCAGATGTGTCTGGAAAAGACTGTACAGCTAATTTTGACCAATGCTGGACAGCAATGCCTCCTGATGACTCACCAGCACCTACGCCTACAGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCAAACCCTTGGCTTTCATCTAGATAG 1269 0.4484 MVSISETKKSLHSLIASNLSKLIIPSSSNDPNQSPSISSPHVIHSRSHSFVGPSPLFAPSSTSLLPFLPELSDDEKEQKKLDPKIGPGDFQILTFVGQGAFGKVFMVKKKGDCSDGDGDGDGIFAMKVMRKDTIIKKNHVDYMKAERDILTKVIHPFIVQLRYSFQTKSKLYLILDFVNGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDAHGHVMLTDFGLSIELEESGRSNSLCGTTEYMAPEILLGKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKLKLPPRLTTEAHSLLKGFLQKDPSTRLGSGPNGDEQIKSHKWFRSINWKKLEARELQPKFKPDVSGKDCTANFDQCWTAMPPDDSPAPTPTAGDHFQGYTYVAPNPWLSSR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03952 422 ProSitePatterns Protein kinases ATP-binding region signature. 96 127 IPR017441 GO:0005524
Rops2g03952 422 Gene3D Transferase(Phosphotransferase) domain 1 178 373 - -
Rops2g03952 422 Gene3D Phosphorylase Kinase; domain 1 89 396 - -
Rops2g03952 422 ProSiteProfiles Protein kinase domain profile. 90 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03952 422 SMART pkinase_C_6 355 414 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops2g03952 422 ProSiteProfiles AGC-kinase C-terminal domain profile. 355 422 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops2g03952 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Rops2g03952 422 PANTHER RIBOSOMAL PROTEIN S6 KINASE 51 416 - -
Rops2g03952 422 Pfam Protein kinase C terminal domain 375 412 IPR017892 GO:0004674|GO:0005524|GO:0006468
Rops2g03952 422 FunFam Non-specific serine/threonine protein kinase 88 202 - -
Rops2g03952 422 SUPERFAMILY Protein kinase-like (PK-like) 88 413 IPR011009 -
Rops2g03952 422 SMART serkin_6 90 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03952 422 Pfam Protein kinase domain 91 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03952 422 FunFam Non-specific serine/threonine protein kinase 178 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03952 Rops-Chr2 72328511 72331736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03952 24 415 AGC Kinase Gene Family AT3G08720 58.195 5.36e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Rops2g03952 Pkinase 2.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03952 K04688 - gmx:100798259 660.603