LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g03935	ATGAAACCTCACCCGTGTCTTGTGGGTAGGTTTCGCCGTCGATCCTTCTCCGTCTCCGGCAACCACTCCAATCTAGAATCTTCTCTAGGTCAGCGAAACCCTCCTCAACGTTCGAAACAATCTACGGCGGCTTCTCCGGTGGCGCAATCGGCCACCGGCGGAGCCGCCAACGGTTCCACTTCGCCTGACGCTGAATCCTGCAATGTTTCCTATCAAAATCCGCACAACCCTAGCAAGATCGATTTGATTCCTCAATCTGAGGGTTCCGATTACAACACAATCAAGCTCGAATGTGAGCGAGCCCTCACTACGTTTCGGCGTGGGAACCACAATAGGTCAATTAAGCTCATGAAGGAGTTGTGTATGAAGGAAGAGAATTTGCCTCACTCAGCTTTCGTTCATCGAATTCACGGCTTCGTTTGTTTCAAAGTGGCGTCGATTATCACCGACCATGCCTCGAAGCAACGGCATTTGAGGAATGCTATTGAGTCTGCGCGTAGAGCGGTTGAGCTTACGCCGAATTCGATTGAGTATGCGCATTTTCATGCTACTTTGTTGTTGGAGGCAGCGACCGAGGCGAAGGATTTTGAGGAGGTTGTGCACGAGTGTGAGAGGGGGCTTGCAATTGAGAACCCTAGTGATCCTGCGAAGGAGACATTGCAGGATGAGAGTGAGCAGAAAGCGTCTACGTTGGAGGGAAGGGTAGCACATATGCAAAATGAGTTGAGACAGCTGATTCAGAAGTCAAACATAGCTTCTTTGTCATCTTGGATGAAAAATTTGAGTAATGGGGAGGAGAGGTTTCGGTTGATTCCTATAAAGAGGACTACGGAAGATCCGATGGAGGTGAGGTTGGTTCAGACTAGAAGGCCAAATGAGATCAAGAAGGTGACCAAGACACCTGAGGAAAGAAGGAAAGAAATTGAAGTTAGAGTCGCAGCTGCAAGACTGTTGCAGCAGAAGTCAGAGTCACCCCAGTCTCCTAATGAAGGAGATAGGGATGATAGAGCATTGGATTCGACTTCAGGATCTGGTCAGAGGATAGGTGATAGGCGAAAGCATGGAAGGAAGAATGGCTCTACAGACGAAAGGAGAAATTGGGTGATCTCGTATTGGAATTCAGTGAGCATGGATATGAAGAAGGAGTGGCTTAGGATTAAAATTTGTGATCTCGATTCCCACTATGGGTCTTCAAAGGATACTTTGCCAAAAGATATTTTAGCAGAAGCTGTGTCTTATGCCGAGGCCAATAAAACATGGAAATTTTGGCTTTGCTGTCATTGTCAGGAGAAATTTTCGAATCCAGAATCTCACAGGCAGCATGTTGTGCAGGAACACATGGAGAGTCTCTTGCCAAAAATGCAGAGACTTTTGCCCCAAAATATTGACAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTCTGGATGTCTCAGCTGCTGTTAAAATGCTTGACAATAAAGCAAATTTCAGAGGCTCATCATTTCCCGAAGATCCATACTTGGGTCATCATACTCAGGACTGCGATAATTATTTTAATGATGGAAGCAACTCATATCATGAGAAGGAAAGTTTAGTGTACAGTATTCATAATTGTATGACAGAAAGCAGTAACTATTGTAAAATTGCAGAAAGTGATGTCAGAGAAGGTGTTGAAGACCAACGGTCTATGGCAATTCCTGTTAATGATTGTTGGCCAGTATCTGATGACTCAGAGCGTGCAAAACTTCTGGAGAAAATTCATGCAGTATTTGAGATGCTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTAACAAGGTCATACAATTTAGTATGGGTGAGATACAGGGTCTTGCTGCTGGTTCTCAGCTTCTAAAGCATGGTGTAGACCAATCACCAATGTGCATATGCTTTCTGGGAGCTTCACAGCTGAAGAAAATTCTCCAATTTCTGCAGGAAATAGCTCATGCTTGTGGGTTGAGTAGATATGCTGATAAAAGTAGTAGTCTCATGAATGATTTGCATAATATCAGTCAAGGTCCTGAGATCAAAGATAAGATTATTCTTGATGGAGATGCATCATGCCTCCTTCTGGATGAGTGTTTACTGCCAACACAGGCTACTCCTAGTACAGCCCAGGGGGCTGTCTTGGTTGACTTGGCTGTCCCAAGTTCTCCTGATGGAATTTCAGACAATAATGATGCTTTGCTATCCTGGATATTTTCAAGTTCACCTATTGGGGATCAACTGACATCATGGATGCGGACCAAAGAAGATAAAATTCGTCAAGGAGTGGAAATTGTCCAGATACTTGAGAAGGAGTTTTATCACCTACAAAGCCTATGTGAGAAGAAGTGTGAGCGTATAAGTTATGAGGAAGCACTGCAGACAGTAGAGGATCTTTGCCTTGAAGAAGGTAAGAAGAGAGAAAATGTTGGTGAATTTGTCCAGCGAAGCTATGAGTCTGTCTTACGAAAGCGGAGAGAAGAGCTCATTGAGAGTGAGAATGATGTGATGTATGTCAGCAACAGGATTGAGTTGGATGCTATATCTAATGTTTTGCAAGAAGCAGAAGCAATGAATGTTAATCAATTTAGCTATGAGGAAACCTATGCTGGTGTGACTTCCCAGTTATGTGACTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGCTGCATAGAAATTGCTATTCAGAAGCTGAAAGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAATGTTTCAGAGATGCAGCAATTGGAACTCAAGCTTGGGCCTATTTCTGCTTATGATTATCGAGCAATATTAGTGCCTCTAGTGAAGTCGTACCTAAGGGCACTTCTGGAAGATTTGGCTGAAAAAGATGCAAGAGAGAAATCTGATGCTGCAAGTGCAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGGTTGTCAAGGGGGGAAGTGAGAACATGAGACATGTGGAGAAAACAAAAGATAAGAAGAAGAATAAAGATCACAGAAAAACAAAAGATTTGAAGGCTACTAGTGGTCCCTTGCTTCAATCTACAACTCTTGATCCCAATCTAGTTGCACCTGATAGTGACTTTCAAGACCTTGAGGTTGTTTCTATGAATGGTGATGATTTGGAACAACATGAAGAGGAGTTTAGGCGTAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAATTTCAACGAAGGATTGAAAATGAGGCCAAACAGAAGCACCTTGCTGAGCAACAAAAGAAATCATCTGGGACAAATCTAGAGGAAGTGACGGACAAACTTCAAGATTGTAAATTGAAGATCGTTGCTGATGGTTCAGATGCACACGAACATGAGCAGTTGCCAAAGGAGAATGGGCGCCCAAGCAATCTAGACAGTGGGCTTATTACCACAGCAAATGGTTCCATGGTGCCAACTAAATCTTCAGCTGATTCAGCTGCCCAAAAGATTAATCATGTGCATCAGTCAAGAGTTAAACAAGCAGATATGCCTAATGGATTTGTTCCAGAGAATGGTCTACCTTTGCCTGATCGGCGTGCAGGAAAAAAGCATAAACGGCATAAGAATTCTTCCAAAATGGTTGATGGAAAGTTTGAACCCGTGTCATCGGAAAAGGAGAACATTGAGGATCCACATACTGATCATCACTTAAGAGAGCAGGCTAAATTTCATAGCAATCAAGATGCTAACAATGTGTTGGAAAACAATGGATCAAAGGGGATGAATGAATTGCAAGTGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAATGGCTGTGCGACAAAGCCTAGACACATATCAAGCACGTGGAAATTTGCCTCCGGGTTCCAGTTTAAGAATGTCACAGAGGACTTCTTTACAAGTAGATTGTTCGGGTTTTCCGCCTGTGGAAGACTCAACTGAGGATGTGAAGGCAGCTACTTTGCTTGGTACCGGACTGAGGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTCATTATACAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCATGTGGGTAATCCCTGCGTTGTCTGTGCGTTGTATGAAATATTTACTGCACTGGACCTTGCATCAAAGGATTCAAGGAGAGAAGCAGTTGCACCTACTTCCCTGCGGATAGCTCTAAGCAACCTGTATCCACAGAGCAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAAGTGCTTCTGATGCAGAATCATTGGAAAGCAACTGCACAGGGTCTTGGGATTGTGCAAACGGTAGTTGTATAGCACATTCACTTTTTGGAATGGACATTTTCGAACAAATGAACTGCTACCATTGTGGTCTTGAGTCCAGACACTTGAAGTATACTTCCTACTTTCACAATATAAATGCCAATGCCCTCCGGACAATGAAGGTCACGTTTGCTGAAAGCTCCTTTGATAAGCTTTTGAATCTTGTGGAGATGAACCATCAATTGGCATGTGATCTAGAAGTTGGTGGCTGTGGCAAGCTTAATCACATCCATCACTTTCTTTCAGCTCCACCCCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCAACTCTGGCAGCCTTGAGCACCAAGATAGATATCAGTGTTCTTTATCGTGGTTTAGATCCTAAAAGCACCCATAACTTGGTTTCGGTGGTTTGCTACTATGGCCAGCATTATCATTGCTTTGCTTATAGTCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGATTGGGCGGATGTTCTCACAATGTGTGAAAGAGGGCATCTTCAACCTCAGGTTTTGGTATTGCTAAAAGAACCACAATTTCTTGAGGTTGGCCAGCGATTTGTGAGAAGATCTTAG	5040	0.4292	MKPHPCLVGRFRRRSFSVSGNHSNLESSLGQRNPPQRSKQSTAASPVAQSATGGAANGSTSPDAESCNVSYQNPHNPSKIDLIPQSEGSDYNTIKLECERALTTFRRGNHNRSIKLMKELCMKEENLPHSAFVHRIHGFVCFKVASIITDHASKQRHLRNAIESARRAVELTPNSIEYAHFHATLLLEAATEAKDFEEVVHECERGLAIENPSDPAKETLQDESEQKASTLEGRVAHMQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIKRTTEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSPNEGDRDDRALDSTSGSGQRIGDRRKHGRKNGSTDERRNWVISYWNSVSMDMKKEWLRIKICDLDSHYGSSKDTLPKDILAEAVSYAEANKTWKFWLCCHCQEKFSNPESHRQHVVQEHMESLLPKMQRLLPQNIDNEWIEMILNCSWKPLDVSAAVKMLDNKANFRGSSFPEDPYLGHHTQDCDNYFNDGSNSYHEKESLVYSIHNCMTESSNYCKIAESDVREGVEDQRSMAIPVNDCWPVSDDSERAKLLEKIHAVFEMLIRHKCLAASHLNKVIQFSMGEIQGLAAGSQLLKHGVDQSPMCICFLGASQLKKILQFLQEIAHACGLSRYADKSSSLMNDLHNISQGPEIKDKIILDGDASCLLLDECLLPTQATPSTAQGAVLVDLAVPSSPDGISDNNDALLSWIFSSSPIGDQLTSWMRTKEDKIRQGVEIVQILEKEFYHLQSLCEKKCERISYEEALQTVEDLCLEEGKKRENVGEFVQRSYESVLRKRREELIESENDVMYVSNRIELDAISNVLQEAEAMNVNQFSYEETYAGVTSQLCDLESGEEDEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNVSEMQQLELKLGPISAYDYRAILVPLVKSYLRALLEDLAEKDAREKSDAASAAFLAELALDSKKVVKGGSENMRHVEKTKDKKKNKDHRKTKDLKATSGPLLQSTTLDPNLVAPDSDFQDLEVVSMNGDDLEQHEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGTNLEEVTDKLQDCKLKIVADGSDAHEHEQLPKENGRPSNLDSGLITTANGSMVPTKSSADSAAQKINHVHQSRVKQADMPNGFVPENGLPLPDRRAGKKHKRHKNSSKMVDGKFEPVSSEKENIEDPHTDHHLREQAKFHSNQDANNVLENNGSKGMNELQVEDEEEERFQADLKMAVRQSLDTYQARGNLPPGSSLRMSQRTSLQVDCSGFPPVEDSTEDVKAATLLGTGLRNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPQSNFFQEAQMNDASEVLAVIFDCLHRSFTRGSSASDAESLESNCTGSWDCANGSCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSYFHNINANALRTMKVTFAESSFDKLLNLVEMNHQLACDLEVGGCGKLNHIHHFLSAPPHVFMTVLGWQNTCESADDITATLAALSTKIDISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKIIGDWADVLTMCERGHLQPQVLVLLKEPQFLEVGQRFVRRS*	1680

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g03935	1679	MobiDBLite	consensus disorder prediction	993	1038	-	-
	Rops2g03935	1679	SUPERFAMILY	Cysteine proteinases	1333	1648	IPR038765	-
	Rops2g03935	1679	Coils	Coil	221	248	-	-
	Rops2g03935	1679	MobiDBLite	consensus disorder prediction	1211	1230	-	-
	Rops2g03935	1679	Gene3D	Cysteine proteinases	1319	1661	-	-
	Rops2g03935	1679	MobiDBLite	consensus disorder prediction	1181	1230	-	-
	Rops2g03935	1679	ProSitePatterns	Zinc finger C2H2 type domain signature.	425	446	IPR013087	-
	Rops2g03935	1679	Pfam	Ubiquitin carboxyl-terminal hydrolase	1334	1642	IPR001394	GO:0004843\|GO:0016579
	Rops2g03935	1679	CDD	Peptidase_C19	1424	1665	-	-
	Rops2g03935	1679	Gene3D	Tetratricopeptide repeat domain	72	323	IPR011990	GO:0005515
	Rops2g03935	1679	ProSiteProfiles	Ubiquitin specific protease (USP) domain profile.	1333	1665	IPR028889	-
	Rops2g03935	1679	MobiDBLite	consensus disorder prediction	17	86	-	-
	Rops2g03935	1679	Coils	Coil	1052	1092	-	-
	Rops2g03935	1679	MobiDBLite	consensus disorder prediction	317	360	-	-
	Rops2g03935	1679	MobiDBLite	consensus disorder prediction	1021	1036	-	-
	Rops2g03935	1679	Pfam	Protein of unknown function (DUF629)	369	900	IPR006865	-
	Rops2g03935	1679	PANTHER	UBIQUITIN SPECIFIC PROTEINASE	66	1660	-	-
	Rops2g03935	1679	Pfam	Protein of unknown function (DUF627)	100	211	IPR006866	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g03935	90	1665	C2H2 Transcription Factor Family	AT3G47890	57.206	0.0	1722

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g03935	-		-	gmx:100799759	2518.81

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops2g03935	2	72090400	72100981	Rops2g03935	2	72090400	72100981	ECH