Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03913 ATGGAGGCACAAGCTACAGGAACAACAACTGAAGGTTCTTTAATATGTCTTGATAATGATAAGGATGAAGATAAAGCAAGTGATGGTATTGAAAATGACAACAAAGATGGAGAAATTACTAGAGATTGTAATTTGCTTGGAAGAGTTGTTCATAATGAAATGGAAGCATTCAAGTTGTACAATGATTATGCCTACTCTGTTGGATTTGGAGTTCGTTGTGGCAAGCAACGTCTTTATGAAAGGACAACACTCATTCGCCAAAAAGAATATGTTTGTCGTAATGAAGGTCAAAAAGGTTCATGGAAGCTTGGAGAGGAGGTTAATAGAAGACTTACAACAAGATGTAATTGCCTTGCAATGATTCGATTTTCAGTTAGCAAAGATGGTTCCATATGGAAGGCGGAATACCTTACAATATTGGCAATGAGATGGATTCAAATGAGTTGTAGTGGAGATGTTTGCACTTATGAAGTGAAGGCGGAAAGAGATAATGCAAAAAGCTATCTAGTAGCTTTCAAGAAAGAAAACTTAGATGTTTCTTGCTCATGTAAGTTCTTTGAAGCAGAAGGCATTTTGTGTAGCCATGCCTTGAAAATTTTGTCACTCCATAATGTCACCATGATTCCTGAGAAATATGTGTTATTAAGGTGGACTAAACAACCAAAGCAAGTGATTTCTTATTCATGGTTGAGTGAGACATCAAGTGAACCCTATAATGGAAATAGTAATGAACCTGAAATCATCTTTCGTAATAGTAGAGCTCAGAGCTCTTATAATATGATCTTACAGTGTGCTACGGATGCAAGAGCAAGGAAAGAGTATGATGTTGCATTTGAACAACTAGTAACAAGATTAAATAATGTTTTAGCAGGCATGGACTTGCATGGAGATGTGAATGAGGGACAAGTTTCAAGAGAAAGACATGAGAAATATATAAAAGAAGTATCAATTAAGAATCCTCCAAAGGCAAGACCCAAGGGTGCACCAAATGTTCGCTTTAAAAGCCATTTGGAAAAATCAAAGCGTAAATTGAAGAAAACAAAAATTGATCAATGCTCAAAGGAAACTTCCTTGTTCTTCCAACCAAGTTCGGTGATTCTTCCCATGCAAGACTCAACATCTATGGTGCCTATAACAACACCAATGCTTCTAAACTCAATGGACATACCAACTCCAAGGAATAATATTCCTTCTAGTTTCACATTTGCTCATCAGTCGATGATGCCAATGACTCCAATGGCACAGTTCATTTCTTCTTTTCACTTGAATGTGATGAACATATTCTGCGACTATGACATGAAATTTGGGAGCCAATTTACTTGTCGAGGAAATGTTGAGCCCTGTCCTTTTGAAGGTCCTAGTGAGATGCTTTTGAGCCTTTTGAATGTGGACAATGCAGAGAGATGGAATAGTGGATATCAGTATAGTTTTCCCGCAAGTAATAGGTCCTGCTTGTGCACTGAAAACAAAAGGCAAAGCATCAAAGAACAAAAAGAGTAA 1500 0.372 MEAQATGTTTEGSLICLDNDKDEDKASDGIENDNKDGEITRDCNLLGRVVHNEMEAFKLYNDYAYSVGFGVRCGKQRLYERTTLIRQKEYVCRNEGQKGSWKLGEEVNRRLTTRCNCLAMIRFSVSKDGSIWKAEYLTILAMRWIQMSCSGDVCTYEVKAERDNAKSYLVAFKKENLDVSCSCKFFEAEGILCSHALKILSLHNVTMIPEKYVLLRWTKQPKQVISYSWLSETSSEPYNGNSNEPEIIFRNSRAQSSYNMILQCATDARARKEYDVAFEQLVTRLNNVLAGMDLHGDVNEGQVSRERHEKYIKEVSIKNPPKARPKGAPNVRFKSHLEKSKRKLKKTKIDQCSKETSLFFQPSSVILPMQDSTSMVPITTPMLLNSMDIPTPRNNIPSSFTFAHQSMMPMTPMAQFISSFHLNVMNIFCDYDMKFGSQFTCRGNVEPCPFEGPSEMLLSLLNVDNAERWNSGYQYSFPASNRSCLCTENKRQSIKEQKE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03913 499 SMART 26again6 179 206 IPR006564 GO:0008270
Rops2g03913 499 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 156 282 IPR031052 GO:0006355
Rops2g03913 499 Pfam SWIM zinc finger 168 201 IPR007527 GO:0008270
Rops2g03913 499 Pfam FAR1 DNA-binding domain 59 130 IPR004330 -
Rops2g03913 499 ProSiteProfiles Zinc finger SWIM-type profile. 168 204 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03913 Rops-Chr2 71717931 71721983 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops2g03913 FAR1 5.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03913 - K17604 hbr:110645710 115.546