Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03911 ATGGAGTTTGCTTCGGAGAAATCTGGTGATGAAGGTAGTGGACTCAAAGAAGAGAAGAGAAGTGAATACAGTGTGGATGATGATGATGGTGTTCATAAACAGGAGACTGTTGTCGAGCAGTCAACCAAGGTTAACACCGAAAGATCCATGGTGGAGGCTGAACCAAGCGCTTCATCCAAAAAGGAAGAGGTTGATGATCAGCTTGAGGCTACTAAAGCCGAAATGGGTGAGTTGAGAGAAGAAAATCAACGGTTAAAGATGGGTTTGAACAAAATATTGAATGAATACCGGACACTAGAAATGCAATTTCACGATTTGGTTAAGCAAGAAACAAAAAGGAATGCTGTTGATAAAGGAGATGATAATAACCATCAAGAAATAATAGAGGAATCGGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCGAGTAATCCAAGAAATGATGAGAAAGTGAAAGTCTCTAAGCAATTGAAGGATGAAGAGTTTAATGAAAACTTGACCCTTGGACTAGACTGTAAATTTGAAACATCAAAATCGGGGAGCACAACTGAAGCTTTGCCAAATGCAAGCCCAGTCAATAGTTCTGAAGTACCAAAGGAAGAAGCTGGGGAGACTTGGCCGCCTAATAAGTCACTCAAGACAATAAGAGATACAGAAGATGAAGTTGCTCAACAAACTCCTGCAAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGTGATACCCCAACAATGAATGATGGGTGCCAATGGAGGAAATATGGACAAAAGATTGCAAAAGGAAATCCTTGCCCTCGAGCTTATTATCGTTGCACAGTTGCACCATCATGCCCAGTAAGAAAACAGGTGCAAAGATGTGTTGATGACATGTCCATTTTATTCACCACCTACGAAGGGACCCACAGCCACACTCTTCCTCTTTCAGCTACTGCAATGGCTTCCACAACTTCTGCAGCTGCTTCCATGCTGTTATCTGGTTCAAGCTCTTCAACAACAGCTGCTAATAATATCCATGGCCTGAACTTGTATTCATCAGATGGTTCCAAATCAAAGCAATTGTACCTGTCCAACCCTACACTATCATCTTCCCCTTCACATCCTCCAACCATCACTCTTGACCTCACTTCAAATCCAGGCTCTTCCTCAACTCCCTTTGTTAGATTTAATTCAAACCACAACCAACCAAGATATCCTTTTTCCACAAGTCTGAGCTTCAGCCCCTCCGAATCCAATGCAATGTCATGGAGCAATAGGTTCCTTAACTACAGTACTACTCAGCCATATAATAGAAACACCCTTAGCACTGTAAATTTTGAAAGACAAACAATGGAAAACATCTACCAATCCTACATGCAAAAGAACAACAACAACAACTCTGTCCCTCCACAAGGTTCTCAACATGCTCTACCAGACACTATATCTGCAGCAACAAAAGCAATAACAGCAGACCCCACTTTTCAGTCAGCTTTGGCAGTAGCACTTAGTTCATTTCTTGGGGCAGGTGGTGGTATTGGAAGCTCACAAGGAAATCAAGGTGTTGGAGAAAATCTGGGTCAGAAAATAAAATGGACAGAGATGTTTCCAGCATCTTCTACTACCTTGGCTGCTCCAACTTCGAAAGTCAATGATTGTGCATCAAGCTTCTTGAACAAAACGCCAGCGAATACACAGACGGGAAGTTTGATGTTTCTACCGTCTTCTTTGCCATTTTCTACCTCCAAAAGCGCTTCTGCGTCTCCTCGTGATAATAGCGACAATTCCAATTAA 1764 0.4206 MEFASEKSGDEGSGLKEEKRSEYSVDDDDGVHKQETVVEQSTKVNTERSMVEAEPSASSKKEEVDDQLEATKAEMGELREENQRLKMGLNKILNEYRTLEMQFHDLVKQETKRNAVDKGDDNNHQEIIEESDLVSLSLGRVPSNPRNDEKVKVSKQLKDEEFNENLTLGLDCKFETSKSGSTTEALPNASPVNSSEVPKEEAGETWPPNKSLKTIRDTEDEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVDDMSILFTTYEGTHSHTLPLSATAMASTTSAAASMLLSGSSSSTTAANNIHGLNLYSSDGSKSKQLYLSNPTLSSSPSHPPTITLDLTSNPGSSSTPFVRFNSNHNQPRYPFSTSLSFSPSESNAMSWSNRFLNYSTTQPYNRNTLSTVNFERQTMENIYQSYMQKNNNNNSVPPQGSQHALPDTISAATKAITADPTFQSALAVALSSFLGAGGGIGSSQGNQGVGENLGQKIKWTEMFPASSTTLAAPTSKVNDCASSFLNKTPANTQTGSLMFLPSSLPFSTSKSASASPRDNSDNSN* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03911 587 MobiDBLite consensus disorder prediction 353 388 - -
Rops2g03911 587 MobiDBLite consensus disorder prediction 37 53 - -
Rops2g03911 587 MobiDBLite consensus disorder prediction 1 81 - -
Rops2g03911 587 MobiDBLite consensus disorder prediction 54 81 - -
Rops2g03911 587 MobiDBLite consensus disorder prediction 177 195 - -
Rops2g03911 587 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g03911 587 Coils Coil 61 109 - -
Rops2g03911 587 Pfam WRKY DNA -binding domain 245 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g03911 587 MobiDBLite consensus disorder prediction 1 36 - -
Rops2g03911 587 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g03911 587 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 508 IPR044810 GO:0003700
Rops2g03911 587 Gene3D WRKY domain 228 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g03911 587 SUPERFAMILY WRKY DNA-binding domain 237 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g03911 587 MobiDBLite consensus disorder prediction 177 224 - -
Rops2g03911 587 FunFam probable WRKY transcription factor 31 229 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03911 Rops-Chr2 71705251 71710109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03911 75 501 WRKY Transcription Factor Family AT5G15130 42.735 3.08e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g03911 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03911 - - pvu:PHAVU_003G192000g 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00727 8 15132148 15134585 Rops2g03911 2 71705251 71710109 ECH
Rops2g03911 2 71705251 71710109 Rops2g03911 2 71705251 71710109 ECH