Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03899 ATGGTTGAGACATCAAAAAACAGGTCTTCTTCTGATAAAATGAATGAAGGGAAAGTCCCAAAGAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAACATTTGAATGAACTCTTTCTTGATCTTGCCAAGGCACTTGATCTTAATGAGCAGAACAATGGAAAGGCTTCTATATTGTGTGAAACTGCTAGGTTGCTAAAGGACTTACTTGGTCAGATTGAATCCCTCAAGAAGGAGAACGTGTCTCTGTTGTCTGAATCTCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAGAATTGTAGCCTAGAAGCTCAAATTGAGAAACTTCTAGGTGAGATACAGGAAAGAGTGGCTCGGTCTAAACCTGACCTGAATGCACCTCCTCATATGGAACTTGATCCACCAGAACAGACAAATTTTCCTGGACAGAGTCTCCAATTGCCTACCATAGAACCTAGTTTGCAGCAAGGACCTACAGTTTTGGTTGTACCTTTTCGCCCTGATCTTCAAGCTTCTTTTCCAGCTCCTAATGTTGCTGAGCTCACACCAAAACCTGCATCTGTTGTTAGTAAACCGCAGCCCAGGTATCCCACACCAGCTGATTCATGGCCATCACAGCTGCTTGGAGAGCAACCAACTTCAAGCTAA 657 0.4323 MVETSKNRSSSDKMNEGKVPKRIHKAEREKMKREHLNELFLDLAKALDLNEQNNGKASILCETARLLKDLLGQIESLKKENVSLLSESHYVTMEKNELKEENCSLEAQIEKLLGEIQERVARSKPDLNAPPHMELDPPEQTNFPGQSLQLPTIEPSLQQGPTVLVVPFRPDLQASFPAPNVAELTPKPASVVSKPQPRYPTPADSWPSQLLGEQPTSS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03899 218 Coils Coil 67 87 - -
Rops2g03899 218 Coils Coil 95 115 - -
Rops2g03899 218 PANTHER TRANSCRIPTION FACTOR BHLH47 5 217 - -
Rops2g03899 218 MobiDBLite consensus disorder prediction 9 30 - -
Rops2g03899 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 20 70 IPR011598 GO:0046983
Rops2g03899 218 Gene3D - 18 93 IPR036638 GO:0046983
Rops2g03899 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 18 86 IPR036638 GO:0046983
Rops2g03899 218 MobiDBLite consensus disorder prediction 1 30 - -
Rops2g03899 218 MobiDBLite consensus disorder prediction 178 218 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03899 7 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 50.870 1.36e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03899 - - gmx:100782436 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03899 2 71446505 71448882 Rops2g03899 2 71446505 71448882 ECH