Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03887 ATGGAGATTCAGCCACTTAAGGGTTGGAGCTCTTACCATGAAAACCCATTTACATTTACGTACCAATTTTCTTACAGTGGAAATGGTAGTAGTAGTAGTGAGTATCCTGCACTAGATTGGCCAGACGATTTTACCATACAGGAGAGCCTTCTTGATGCTGTCCCTCTTATGGAGTGTTACCCTGAAGATCCTTTGCATGAAACTCTCACCATTGAACCAGCACCAACCGTGCAAGACTACGATTTTTATGATGTGAGAAAAGGTTTCTCTGTCTGGAACGAAATTGATGCGGGGTTTGATTCAGATAAAGTTTTTTTATATTGCAACAATGAAGAAAGTGGAAAGGAAAATGTGGAAGATGGGAAGGTTAAGCGAGGGAGAGAAGAGAGAAGTAGTAGCACTACTAGAATGTTATCAAGGAAGACCATATCTCAGTACTTTTACGTGCCCATAACACAAGCAGCCAGGGAACTTAATGTGGGCCTAACACTTTTGAAGAAAAGGTGCAGGGAATTGGGAATTCGAAGGTGGCCCCACAGGAAGCTCAGGAGCCTACAAACACTGATAAATAATGTACAGGAGCTAGGGAAAGAAGAGGGGCAGGAGGAGAGTGAAGAAAAGTTGAGGAATGCAATTGAGATATTGGAGAAGGAAAAGAAGCTTATGGAGGAAATGCCAGATATGCAACTAGAAGATAAGACAAAAAGGCTTAGACAAGCATGTTTTAAGGCCAACTACAAGAAGAGGAAGCTCATGGAACCACATTCTTCTTTCAGTGGAAGGGCTGGAAGTATTTGA 798 0.4211 MEIQPLKGWSSYHENPFTFTYQFSYSGNGSSSSEYPALDWPDDFTIQESLLDAVPLMECYPEDPLHETLTIEPAPTVQDYDFYDVRKGFSVWNEIDAGFDSDKVFLYCNNEESGKENVEDGKVKRGREERSSSTTRMLSRKTISQYFYVPITQAARELNVGLTLLKKRCRELGIRRWPHRKLRSLQTLINNVQELGKEEGQEESEEKLRNAIEILEKEKKLMEEMPDMQLEDKTKRLRQACFKANYKKRKLMEPHSSFSGRAGSI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03887 265 Coils Coil 198 225 - -
Rops2g03887 265 ProSiteProfiles RWP-RK domain profile. 118 206 IPR003035 -
Rops2g03887 265 PANTHER PROTEIN RKD4 116 260 IPR044607 GO:0003700
Rops2g03887 265 Pfam RWP-RK domain 138 185 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03887 Rops-Chr2 71228777 71229883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03887 23 250 AtRKD Transcription Factor Family AT1G18790 48.707 1.54e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Rops2g03887 RWP-RK 5.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03887 - - gmx:100788666 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03887 2 71228777 71229883 Rops2g03887 2 71228777 71229883 ECH