Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03882 ATGTACATCATAACCTATTTCAAATCCAAATTGCTGCTGCAAAGATTAAGGTTATTCAAGTTGTGTCAAGAAATCTGTGCACATTTGACAGAGTATCTACAAAGTGGGAGAGCCACTGAGAAGTCAGATGTATATAGCTTTGGGGTTCTATTGCCGGAACTTGTTACTGGAAAGAGGCCTACAGATACCTGCTTTGCAAAGAGAGGTTTGAATGTTGTTGGCTGGTTGAACACATTACTGAGAGAAAACAGATTGGAAGATGTGGTAGAAAAAAGGTGCACTGATGCAGATGCAGGAACACTTGAAGTAATTCTTGAGCTAGCAGCAAGATGCACAGATGGAAATGCAGATGATCGTCCATCAATGAACCAGGTGTTACAGCTGCTGGGACAAGAGGTTATGTCTCCTTGCCCAAGTGACAATTTGGGCCTCCCTAGGCCCCCTGCAGCCCTTCACCCATCTATAACTAAAGAAGTTATACTAGAAAGTGGCTTGAACTATGTTTCTGGTGGTGGAGGCATCTTGAATGAAACTGGAACCTATTTTATCCAAAGATTATATCGAGACAAACAAATTGAGCTGTTTCAAGGGACACAGGAACTAATCAGAGGCAAAATTAGAAAAAAGGTAGCAGATAAGATTTTTCAGGAAGCTCGTTATGTGGTTGCTTTAGGGAGCAATGACTTCATCAACTACTATTTGATGCCTGTTTACCCTGATCCATGGACATACAATGATGAAACCTTCATGGACTTCTTGATAGGAACACTGCAAAGACAACTGGAGCTACTTCATATCTTAGGAGCAAGGAAATTGATGGTTGTTGATGGTTTATGA 837 0.411 MYIITYFKSKLLLQRLRLFKLCQEICAHLTEYLQSGRATEKSDVYSFGVLLPELVTGKRPTDTCFAKRGLNVVGWLNTLLRENRLEDVVEKRCTDADAGTLEVILELAARCTDGNADDRPSMNQVLQLLGQEVMSPCPSDNLGLPRPPAALHPSITKEVILESGLNYVSGGGGILNETGTYFIQRLYRDKQIELFQGTQELIRGKIRKKVADKIFQEARYVVALGSNDFINYYLMPVYPDPWTYNDETFMDFLIGTLQRQLELLHILGARKLMVVDGL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03882 278 Gene3D Transferase(Phosphotransferase) domain 1 19 131 - -
Rops2g03882 278 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 139 275 - -
Rops2g03882 278 Pfam Protein tyrosine and serine/threonine kinase 31 129 IPR001245 GO:0004672|GO:0006468
Rops2g03882 278 SUPERFAMILY Protein kinase-like (PK-like) 31 137 IPR011009 -
Rops2g03882 278 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03882 278 Gene3D SGNH hydrolase 132 276 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03882 Rops-Chr2 71200140 71203744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03882 31 138 Receptor kinase-like Gene Family AT2G35620 51.852 3.98e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Rops2g03882 PK_Tyr_Ser-Thr 9.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03882 - - gmx:100815129 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03882 2 71200140 71203744 Rops2g03882 2 71200140 71203744 ECH