Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03878 ATGGCCACGGTCACCACACATGCTTCTGCCACCCTTTTCAGGCCATGCACCTCTAAAACAAGGTTCCTTACTGGCTCTTCCACTAAACTAAACAGGGAAGTAGCTGTTAGTTTTAGACCAATTGGGTCTCCTTCATTTACCTCTTTCAAGGTTCATGCCAAGAAAGGAGAGTGGTTACCAGGCTTGGCCTCCCCATCTTACCTAAATGGCAGTCTTCCTGGTGATAATGGATTTGACCCACTGGGGCTTGCTGATGACCCAGAGAACTTGAGGTGGTTTGTTCAAGCTGAGTTAGTTAATGGACGTTGGGCCATGTTAGGTGTTGCAGGAATGTTGCTTCCTGAAGTATTCACCAAAATTGGTATCCTCAATGTCCCCAAATGGTATGATGCTGGGAAAGAAGAATACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATTTTGTTCCATTACGTGGAAATCAGAAGGTGGCAGGACATTAAGAACCCTGGAAGTGTCAACCAAGACCCTATCTTTAAGCAATACAGTTTACCCCCAAACGAGGTTGGATACCCTGGTGGCATTTTTAACCCCTTGAATTTTGCACCTACTCTGGAGGCTAAAGAGAAGGAAATTGCCAATGGGAGATTGGCAATGTTAGCATTCTTGGGATTTCTGATTCAGCACAATGTGACAGGCAAAGGACCATTTGACAACCTCTTGCAGCATCTCTCAGACCCTTGGCACAACACCATTATCCAAACATTGAATGACAACTAA 765 0.4484 MATVTTHASATLFRPCTSKTRFLTGSSTKLNREVAVSFRPIGSPSFTSFKVHAKKGEWLPGLASPSYLNGSLPGDNGFDPLGLADDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGILNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLIQHNVTGKGPFDNLLQHLSDPWHNTIIQTLNDN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03878 254 Pfam Chlorophyll A-B binding protein 65 224 IPR022796 -
Rops2g03878 254 Gene3D Chlorophyll a/b binding protein domain 65 244 - -
Rops2g03878 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 30 250 IPR001344 GO:0009765|GO:0016020
Rops2g03878 254 SUPERFAMILY Chlorophyll a-b binding protein 54 251 - -
Rops2g03878 254 FunFam Chlorophyll a-b binding protein, chloroplastic 65 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03878 Rops-Chr2 71144716 71145831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03878 58 252 Chloroplast and Mitochondria Gene Families AT3G61470 56.219 3.97e-76 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03878 K08910 - rcu:8263414 468.388