Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03872 ATGGAAAGTGCAGGAATAGAAGCACCCTGGCGATTTCGCTCTGTTTCCAAACTCGTATTATGTGCCATTTCTGGTGCTCTCACCGGTTGTTTTGCTATTGCTGGGGCTCTCACGGGAGCTATAGCTGGTGCTTTAGCAGCTAAGGCTACCAAGAGTGGTTTTCTCCGGGGAGTTTCATTAGGTGCCATTGCAGGGGCTATACTCTCGGTGGAGGTGTTGGAAGCTTCCCGTGCTTACTGGTGTATGGAGCAAACTGGTTCACGGGGCGCATCATCTATGGCAGATTTCATAGAAGAACTTGTTCGTGGGAGGCTTGTAGAGGAATCACTTACACCTGCTATTTTAAATGCTTACAATTTGCAGTTTGAGCAGGCTGGCATTGCTAATACAGGCTATGACGAGATTCATGATGTTCATAGCTTAGTACCATCCAGAGGATTGTCAGGGGATTCATTGAAGAAGCTACCGCGCCATATGATCTTGAAGCACATGAAGGCAGAGAATACTTGTTGTACAATATGTTTGCAGGATATTGAAGTAGGCGAAATGGCAAGAAGTCTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCGTGTCCTGTCTGTAGACAGAATGTGTAG 651 0.4593 MESAGIEAPWRFRSVSKLVLCAISGALTGCFAIAGALTGAIAGALAAKATKSGFLRGVSLGAIAGAILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILNAYNLQFEQAGIANTGYDEIHDVHSLVPSRGLSGDSLKKLPRHMILKHMKAENTCCTICLQDIEVGEMARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03872 216 ProSiteProfiles Zinc finger RING-type profile. 171 213 IPR001841 -
Rops2g03872 216 SMART ring_2 171 212 IPR001841 -
Rops2g03872 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 216 IPR013083 -
Rops2g03872 216 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 14 215 IPR044523 -
Rops2g03872 216 SUPERFAMILY RING/U-box 152 216 - -
Rops2g03872 216 Pfam Ring finger domain 171 213 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03872 Rops-Chr2 71042726 71046134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03872 14 216 C3H Transcription Factor Family AT1G74410 57.843 2.62e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03872 - - gmx:100800105 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03872 2 71042726 71046134 Rops2g03872 2 71042726 71046134 ECH