Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03868 ATGGAGACCGAGGCACTTATCAATTTGAACGGCAAAGATAGCAAGAGTGGTGATGGCTTCATTGATAGAAGCAAAGTTAGGATTTTGTTGTGTGATAACGATTCCAAGAGTTCTGAGGAGGTTTCTACCCTTCTATTGAGATGCTCTTATCAGGTTACTTCGGTAAGGTCAGCAAGGCAAGTAATTGATGCACTGAATGCGGAGGGGCAATATATAGATATCATACTAGCTGAAGTTGACCTTCCAATAAAGAAGGGCATGAAGATGTTGAAGTACATAACACGGGATAAAGAATTGCGCCGAATCCCTGTTATAATGATGTCTGCACAAGATGAGGTATCAATTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGAACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGACGCATGCTTGGACTTGTAGAGAACAACATCTTGAATTATGACTTTGATCCGGTAGCATCAGATCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACTCAGACGACAAGTCTAAAAAAAGCACTAATTCAGATGCAGGAATATCAATCCAACAAGAACAAGAGGCTAGTATTGCCACAGCTGCTGCTGTTGTTGAGGAGCTTCCAGATGCTCATTTATCAGAATATCAGCCTGATGTACCCGGAATTAGTGATCGCCGAACAGGTACTCCGGGGCAGCATCCATCATGCAACGAAATTACTGATGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTAAGGATTGGAGAGTCATCGGCCTTTTTCACTTATGTGAAAGCAACAATGCTGAAGAGCAACTTTGAAGAGATTGCTCATGTTGAAAATAATGCTACTACACAAGTGAGGGTGAAAGAAATGAATCAAGCATGTGCTCAACATGAGGGTAATGACGTTGAAACACATGAAAATGGAGAAACGTTTGGAAGCCATTCACAAGATGACTTACCCAGCAGCAATAGTATCCCTGATTCTTTCTCTATTGAGAGATCTTGCACTCCACCTGCATCAATGGAAGTTTCACAGCAAAAGAATTATCAGGAAGAACACCTTCAGGGGTTGGTGCATCCAAGAAATGGAAGTCATGGTTCTGAGCTTGTACCATCTGGCATGCCTTCCCAACATGCTTATCCATATTATATTTCAGGAGTTGTTAATCATGTTATGATGCCATCATCAGCACAACTGTATCAAAAGAATATGCAGGACCTGCAGGGTCATGCTAATTCATCTATGATTGCACAGTACAATCATCTTCCCCAATGTCCTCCTCATGCAACTGGGATGACATCCTTCCCATATTATCCAATGAGTATTTGCTTACAACCTGGTCAGATTTCTACAGCTCATCCATGGCCATCATTAGGAAGTTCAAGTTCATGTGAAGTAAAATTAAGTAAAGTTGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTACGTCAATAGGAAACAACTTGCTGAAAGGCGGCCTCGTGTAAGGGGACAGTTTGTCAGAAAGTTGAATGGTGTTAATGTAGGTCTTAATGGACAACCTGCTTCCACTGACTATGATGAAGATGATGAAGAGGAAGAAGAAAACCAGGTAGCAAGAGATTCCTCTCCCGAGGATGCTTGA 1710 0.414 METEALINLNGKDSKSGDGFIDRSKVRILLCDNDSKSSEEVSTLLLRCSYQVTSVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDPVASDPSDANTNSTTLFSDDSDDKSKKSTNSDAGISIQQEQEASIATAAAVVEELPDAHLSEYQPDVPGISDRRTGTPGQHPSCNEITDGHFSSGPKKSELRIGESSAFFTYVKATMLKSNFEEIAHVENNATTQVRVKEMNQACAQHEGNDVETHENGETFGSHSQDDLPSSNSIPDSFSIERSCTPPASMEVSQQKNYQEEHLQGLVHPRNGSHGSELVPSGMPSQHAYPYYISGVVNHVMMPSSAQLYQKNMQDLQGHANSSMIAQYNHLPQCPPHATGMTSFPYYPMSICLQPGQISTAHPWPSLGSSSSCEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKLNGVNVGLNGQPASTDYDEDDEEEEENQVARDSSPEDA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03868 569 ProSiteProfiles CCT domain profile. 489 531 IPR010402 GO:0005515
Rops2g03868 569 Gene3D - 26 227 - -
Rops2g03868 569 MobiDBLite consensus disorder prediction 546 561 - -
Rops2g03868 569 MobiDBLite consensus disorder prediction 328 352 - -
Rops2g03868 569 Pfam CCT motif 489 531 IPR010402 GO:0005515
Rops2g03868 569 SUPERFAMILY CheY-like 22 151 IPR011006 -
Rops2g03868 569 MobiDBLite consensus disorder prediction 226 263 - -
Rops2g03868 569 MobiDBLite consensus disorder prediction 240 256 - -
Rops2g03868 569 Pfam Response regulator receiver domain 28 139 IPR001789 GO:0000160
Rops2g03868 569 MobiDBLite consensus disorder prediction 318 352 - -
Rops2g03868 569 MobiDBLite consensus disorder prediction 535 569 - -
Rops2g03868 569 MobiDBLite consensus disorder prediction 165 197 - -
Rops2g03868 569 ProSiteProfiles Response regulatory domain profile. 27 145 IPR001789 GO:0000160
Rops2g03868 569 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 233 IPR045279 GO:0009736
Rops2g03868 569 SMART REC_2 26 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03868 Rops-Chr2 70998435 71004209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03868 7 568 Response Regulator Gene Family AT5G61380 50.845 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Rops2g03868 Response_reg 1.9e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03868 K12127 - gmx:100786522 920.613