Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03858 ATGGGGTGTGTGGTAGTGAAGCAGGGGGTGTCAGTGACGCCTGCTATAGACCACTCGGTTGAGTCGGAGAGGAACAGGAAGAAGAAGACTGAGTCAGTGGGAGCGAGTAGGAGCGAGTTGGGTGAGTCAGGGAGGGCGAGTTCCAATGGTGGAAGTGAGTCTCTCAGCTTCAGATTGGGGAACTTGAGTAAGTATGTGGAGGGGGAGCAAGCTGCCGCCGGTTGGCCGGCGTGGCTCAGCGCCGTCGCGTCGGAAGCCATTCACGGTTGGGTGCCGCTCAGAGCTGATGCATTTGAGAAGCTTGACAAGATTGGGCAGGGTACGTATAGTAGTGTTTTCCGAGCAAAGGAGCTTGAGACAGGAAAGATAGTGGCTCTGAAGAAGGTGAGATTTGACAATTTTGAGCCAGAAAGTGTCAGGTTTATGGCACGAGAAATATTGATTCTTAGAAGGCTTGATCATCCAAACATCATTAAACTGGAGGGCTTGATTACTTCCAGATTGTCTTGTAGCATCTACCTTGTATTTGAGTACATGGAGCATGACATCACTGGGCTCTTGTCTAGACCAGAAATCAACTTCAGTGAATCACAGATCAAATGCTACATGAAACAGTTGTTATCTGGTCTTGAACATTGTCACTCACGGGGTGTAATGCACCGGGACATCAAAGGATCAAATCTCCTGGTGAATAATGAAGGGATATTAAAGGTGGCAGATTTTGGATTGGCAAACTTCTCCAATTTAGGGAACAAGCAACCACTCACCAGTCGTGTAGTCACCTTATGGTACCGTCCTCCGGAACTTTTGCTCGGTTCAACAGATTATGGTCCATCTGTGGATCTCTGGAGTGTTGGTTGTGTATTTGCTGAGCTACTAGTTGGGAAGCCTATACTTAAGGGGAGAACAGAGGTGGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCCCCACCAGATGAATACTGGAAAAAGACCAGACTTCCTCATGCAACTTTGTTCAAGCCTCAACAACCATATGATAGTTGCCTTCGAGAGACATTTAAAGATTTTCCCACAACCAGTGTAAATCTGCTACAAACTCTTCTTTCTGTTGAACCAAACAAACGTGGGACTGCCTCATCTGCCCTCTCATTGGAGTATTTCAAAACAAAACCTTATGCATGTGACCCATCAAGCTTACCGATATGCCCACCTAGCAAGGAGATTGACGCAAAACATGAGGAGGAATCAAGAAGGAAAAAGATTGGTGGGCGAGTTTGTGGGCCTGAAACAAGAAAACCATCAAGAAAGCCACTAGGACTGAGCAAATTAGCCCCAGCAGAGGATTTGACAAGTCAAATTCAAACTTGCCTAAAGATGGATGATGCATCTGCCCACATCCTTAAAGAAGAGAACACTAACATTGGTGAGGAAGCACCAAAGCCATCTAGTGTTAAACCAGAAGATGCTTCCCATATGAAGAATGCATCACTAGATATTCCTTTTCCTGGACCATTACAAGTTTCAAGATCAAGTGGTTTTGCATGGGCAAAAAGGCGTAAAGATGACACTGCAATTAGATCCCACAGTCGATCTATTTCTAGAGGACATATATTTAATTCATTAGAACCTTCTACACTGAACTCCAGGAATAATTCTGACTCCAGAAACTACGAACATAATGAACTTTCTGGGGGACACACCAACTCCAGGGGCCATGACCTACTTGAAATTTCCAAGCTTGCAATGCAACATCAATGGAGTAAGTTTGATCGTCCAGATTCATTTGATACCTCTGAAGAGTACCATTCACAAGAACTGTCTACGGTGCTTTATCATAGAGAAGATTCACTGTCCAAGAGAAGTAACCTGAGTTATCAGGATCAAGGAGAGAAGGTTGAATTTTCAGGGCCCCTACTATGTCAAATGCACACAGTTGATGAGCTCTTAGAAAGACATGAGCGTCACATCCGGCGTACTATCCGAAGATCATGGTTTCAGAGAGGTAAGAAGCATGGGAAATAA 2007 0.4479 MGCVVVKQGVSVTPAIDHSVESERNRKKKTESVGASRSELGESGRASSNGGSESLSFRLGNLSKYVEGEQAAAGWPAWLSAVASEAIHGWVPLRADAFEKLDKIGQGTYSSVFRAKELETGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSRPEINFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNLGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLVGKPILKGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRETFKDFPTTSVNLLQTLLSVEPNKRGTASSALSLEYFKTKPYACDPSSLPICPPSKEIDAKHEEESRRKKIGGRVCGPETRKPSRKPLGLSKLAPAEDLTSQIQTCLKMDDASAHILKEENTNIGEEAPKPSSVKPEDASHMKNASLDIPFPGPLQVSRSSGFAWAKRRKDDTAIRSHSRSISRGHIFNSLEPSTLNSRNNSDSRNYEHNELSGGHTNSRGHDLLEISKLAMQHQWSKFDRPDSFDTSEEYHSQELSTVLYHREDSLSKRSNLSYQDQGEKVEFSGPLLCQMHTVDELLERHERHIRRTIRRSWFQRGKKHGK* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03858 668 MobiDBLite consensus disorder prediction 403 426 - -
Rops2g03858 668 PANTHER CELL DIVISION PROTEIN KINASE 96 386 - -
Rops2g03858 668 ProSiteProfiles Protein kinase domain profile. 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03858 668 Gene3D Phosphorylase Kinase; domain 1 85 180 - -
Rops2g03858 668 SMART serkin_6 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03858 668 Pfam Protein kinase domain 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03858 668 MobiDBLite consensus disorder prediction 403 434 - -
Rops2g03858 668 FunFam probable serine/threonine-protein kinase At1g54610 85 180 - -
Rops2g03858 668 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Rops2g03858 668 MobiDBLite consensus disorder prediction 19 35 - -
Rops2g03858 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Rops2g03858 668 FunFam probable serine/threonine-protein kinase At1g54610 181 420 - -
Rops2g03858 668 SUPERFAMILY Protein kinase-like (PK-like) 91 389 IPR011009 -
Rops2g03858 668 Gene3D Transferase(Phosphotransferase) domain 1 181 421 - -
Rops2g03858 668 MobiDBLite consensus disorder prediction 16 53 - -
Rops2g03858 668 MobiDBLite consensus disorder prediction 535 564 - -
Rops2g03858 668 CDD STKc_CDK9_like 98 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03858 Rops-Chr2 70900432 70906205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03858 90 414 Core Cell Cycle Gene Families AT5G10270 50.733 1.45e-111 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops2g03858 Pkinase 3.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03858 - - gmx:100784406 1174.07