Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03830 ATGTCTCCTTTGGTTATTGGCTTTGCTACCGTTGTAGCAGCGATTCTCATTTACAAGCTTTTGAATCTCATAATAACACGACCTTCCTTACCTCTACCACCAGGCCCACGACCATGGCCCATAGTGGGAAACTTGCCCCACATGGGTCCAGTGCCACACCATGCCCTTGCAGCGTTGGCTCGTAAACACGGCCCTCTCATGCACCTTCGCTTGGGCGTCGTTGACGTGGTGGTGGTTTCTTCAGCCTCCGTCGCCGAGCAGTTTTTGAAGGTTCACGATGCCAATTTTTCAAGCCGGCCACCGAACTCCGGCGCCAAATACATGGCTTATAACTATCAAGATCTTGTGTTTGCTCCCTACGGCCCACGGTGGCGGTTGCTCCGGAAAATAAGCTCCGTTCATATGTTCTCCGGCAAGGCCTTGGATGATTTTAGACACATTCGACAGGAAGAGGCAACAAGATTGACACACAATTTAGCAAGTTCAGGCTCTAAAGCAGTGAACCTGGGGCAACTGCTGAATGTATGCACCACCAATGCATTGGCAAGGGTAATGATAGGACGACGAGTTTTCAATGATGGTAACGGTGGTTGTGATCCTAGAGCAGATGAGTTTAAGTCTATGGTGGTGGAGCTTATGGTATTAGCTGGAGTTTTCAATATTGGTGACTTTGTTCCTGCCTTGGAGTGGCTAGACCTTCAGGGAGTGCAAGCCAAGATGAAGAAATTACACAAGAAGTTTGATGCATTTTTAGCCAGCATTGTTGAGGAACACAAGACTTCCAAGAGTGAGAAGCACCAAGACTTGTTGAGTACATTGTTGTCACTCAAAGATGTTCCTGAGGATGTAGACAAACTCAGTGATACAGAAATCAAAGCCCTACTTTTGAACATGTTTGCGGCTGGGACAGACACATCATCAAGCACAACAGAGTGGGCAATTGCTGAACTAATCAAGAACCCAAGAATTATGGTCCATGTCCAACAAGAGCTGGACAGTGTTGTGGGGCAGGACAGGCTTGTGACTGAACAAGACTTGCCCAACCTTCCTTACTTAGAGGCTGTGGTGAAGGAAACATTTCGTCTCCATCCATCAACCCCTCTTTCACTCCCTCGTGTTGCAGCAGAGAGTTGTGAGATCTTCAACTGCCACATCCCCAAAGGTGCAACTCTGTTGGTCAATGTTTGGGCCATAGCTCGTGACCCCAAGGAATGGCATAACCCATTGGAGTTCAAGCCCGAAAGGTTCCTCCCCGGTGGTGAGAAGGCTCATGTTGATGTTAGGGGCAATGACTTTGAGGCTATACCCTTTGGTGCTGGACGTAGAATATGTGCTGGTATGAGCCTGGGGCTTAGGATGGTTCAACTTCTCACTGCAACATTGGTACATGCATTTGAATGGGAGCTAGAGAATGGGCTGAACCCAGAAAAGCTCAACATGGATGAAGCATATGGGCTTACTCTGCAACGAGCTGTGCCTCTTTCGGTCCACCCTCGCCCTAGGCTCTCACCACGTGTGTACTCATCATCTTACTAA 1536 0.4844 MSPLVIGFATVVAAILIYKLLNLIITRPSLPLPPGPRPWPIVGNLPHMGPVPHHALAALARKHGPLMHLRLGVVDVVVVSSASVAEQFLKVHDANFSSRPPNSGAKYMAYNYQDLVFAPYGPRWRLLRKISSVHMFSGKALDDFRHIRQEEATRLTHNLASSGSKAVNLGQLLNVCTTNALARVMIGRRVFNDGNGGCDPRADEFKSMVVELMVLAGVFNIGDFVPALEWLDLQGVQAKMKKLHKKFDAFLASIVEEHKTSKSEKHQDLLSTLLSLKDVPEDVDKLSDTEIKALLLNMFAAGTDTSSSTTEWAIAELIKNPRIMVHVQQELDSVVGQDRLVTEQDLPNLPYLEAVVKETFRLHPSTPLSLPRVAAESCEIFNCHIPKGATLLVNVWAIARDPKEWHNPLEFKPERFLPGGEKAHVDVRGNDFEAIPFGAGRRICAGMSLGLRMVQLLTATLVHAFEWELENGLNPEKLNMDEAYGLTLQRAVPLSVHPRPRLSPRVYSSSY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03830 511 Gene3D Cytochrome P450 26 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 FunFam Red aleurone1 25 499 - -
Rops2g03830 511 PANTHER CYTOCHROME P450 98A9 7 508 - -
Rops2g03830 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops2g03830 511 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03830 511 SUPERFAMILY Cytochrome P450 33 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03830 Rops-Chr2 70526107 70531022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03830 8 508 Cytochrome P450 AT5G07990 67.126 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03830 K05280 - gmx:547475 830.091