Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03826 ATGCAGGAAGAGGTAGCAAGATTGACACAAAATTTAGCAATTTCAGGGTCTAAAGCAGTAAAGTTGGGACAACAGTTGAATGTATGCATCACCAATGCATTGGCAAGGGTAATGATAGGACGACGAGTTTTCAATGATGGTAACTGTGGTTGTGATCCTAGAGCAGATGAGTTTAAGTCTATGGTGGTGGAGCTTGTGGTATTGGGTGGAGTCTTCAATATCAGTGACTTTGTTCCTGCCTTAGAGTGGCTGGACCTTCAGGGAGTGCAAGCCAAGATGAAGAAATTACACAAGAAGTTTGATGCATTTTTAGCCAGCATTGTTGAAGAACACAAGACTTCCAAGACTGAGAAGCACCAGGACTTGTTGAGTATGTTGTTGTCACTTAAAGATGCTCCTGACAAACTCAGTGATACAGAGATCAAAGCATTACTTCTGAACATGTTTATTGCTGGGACGGACACATCATCAAGCACAATAGAGTGGGCAATTGCTGAACTAATCAAGAATCCAAGAATTCTAGTCCGTGTCCAACAAGAGCTGGACAGTGTTGTGGGGAAGGACAGGCTTGTGACTGAACAAGACTTGCCCAACCTTCCTTACTTAGAGGCTGTGGTGAAGGAAACATTTCCCCGTGACCCCAAGGAATGGCATAACCCATTGGAGTTCAAGCCTGAAAGGTTCCTCCCCGGTGGTGAGAAGGCTGGTGTTGATGTTAGGGGCAATGACTTTGAGGTCATACCCTTTGGCGCTGGACGTAGAATATGTGCTGGTATGAGTCTTGGACTCAGGATGGTTAAACTTGTCATAGCAACCCTGGCCCATGCATTTTATTGGGAGCTGGAGAATGGGCTGAACCCAGTAAAGCTCAACATGGATGAAGCGTATGGACTCGGCCTACACAGAGCTGAGCCTCTTTCGGTCCACCCTCGACCCAGGCTCTCGCCACATGTGTTTATGTTGTTCGGTCTTCCAAGATGGTTTAAGCAAATTGCTCATGTGTGTTATTTGCTCTTCCCGATCTATTTCACTCCAAAGGTTATTGGATTAATCTTTGAGGGCAATTAG 1068 0.4541 MQEEVARLTQNLAISGSKAVKLGQQLNVCITNALARVMIGRRVFNDGNCGCDPRADEFKSMVVELVVLGGVFNISDFVPALEWLDLQGVQAKMKKLHKKFDAFLASIVEEHKTSKTEKHQDLLSMLLSLKDAPDKLSDTEIKALLLNMFIAGTDTSSSTIEWAIAELIKNPRILVRVQQELDSVVGKDRLVTEQDLPNLPYLEAVVKETFPRDPKEWHNPLEFKPERFLPGGEKAGVDVRGNDFEVIPFGAGRRICAGMSLGLRMVKLVIATLAHAFYWELENGLNPVKLNMDEAYGLGLHRAEPLSVHPRPRLSPHVFMLFGLPRWFKQIAHVCYLLFPIYFTPKVIGLIFEGN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03826 355 Gene3D Cytochrome P450 1 210 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS P450 superfamily signature 256 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS P450 superfamily signature 204 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS P450 superfamily signature 151 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS P450 superfamily signature 247 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 Gene3D Cytochrome P450 211 314 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 Pfam Cytochrome P450 2 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 Pfam Cytochrome P450 212 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 SUPERFAMILY Cytochrome P450 1 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS E-class P450 group I signature 140 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS E-class P450 group I signature 160 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS E-class P450 group I signature 29 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS E-class P450 group I signature 246 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS E-class P450 group I signature 256 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 PRINTS E-class P450 group I signature 206 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03826 355 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 249 258 IPR017972 GO:0005506|GO:0016705
Rops2g03826 355 PANTHER CYTOCHROME P450 98A9 2 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03826 Rops-Chr2 70480248 70484847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03826 2 321 Cytochrome P450 AT5G07990 55.495 5.20e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03826 K05280 - gmx:547475 475.707