Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03807 ATGATGACTGAAAATTCAAGTGAAGGTTTCCAAGCCAAGCAAAAGGGTGATGATGAGATTAAAATTGAGAAGTTCCCCAAGACACCCTCTTCCTCAAGACAATGGACAGCATTCAGAAACCCAAGAATCGTGCGAGTCTCACGTGCCACGGGAGGGAAAGATAGGCATAGCAAGGTGTGCACCATTAGGGGACTGAGGGACAGGAGGATTAGGTTGTCTGTACCCACAGCAATTCAATTATATGATCTTCAAGACAGGCTTGGGCTCAGCCAACCTAGCAAGGTGGTAGATTGGTTGCTTGAAGCCACCCAATCTGATATTGATAAGCTCCCACCACTTCAAATTCCTCAGTGTTTTGCTCAGTTTCATCAACAAACCCTATTGCCTCATCATGAATCAGGTACCTCCAAGCTTTCTCTTGGAGGCTTCTATGATGCTACTAGTGGAGGAAATCTGAACCTCATGGCAAAGTCAAGGTTTTGGGATATAGATTCAGTATCATCAAGACTAAAAGGTAAGGAAGTTGAAAGTGAGTCCACCTATGGGAGGATCAAAACAAATGAAAGAGAAAATCAAAGTGGAATTGGTGGTTATAATAGACAGGATTCAGCTTATAAGTTCTTCCCCATGGGGATTAACTCTTCTTTGCTAAACAATGCCATGACAAATAACTCTTCCTACCATTCGGAGCCTTCAAGTTTATCTTTATCTCAATTTGGAAGCCATGGATTATTGTTTCCTTACCAGGTGGATTCCCATTCAAGCAGTGGCAGTGCTGTACCATTTTCATCTTCTTTGTCTGTACCATCTGGTTCCCAATTACTTTTTGGTCCATCTTCTGCTACACCATCGCTTTTCACTCCGCATGCTCAATTTATGGCCAACACAATGGAAAGTGATCCAAGACAATCCAACCATATTCAGATCTTGAGCTCCACTTCCCAAGTCATACCTCATCATCCTCTCATTCCATCTCTTCATTCAATCAATTCACCTCTTAGACGCCTTCCAACACCATTTACTTCCAAGCTTCTTGATTCAGATAATAACAATAATAGGCAACCAGATATGGGTGGCAATCGTTCTTGA 1089 0.4233 MMTENSSEGFQAKQKGDDEIKIEKFPKTPSSSRQWTAFRNPRIVRVSRATGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLEATQSDIDKLPPLQIPQCFAQFHQQTLLPHHESGTSKLSLGGFYDATSGGNLNLMAKSRFWDIDSVSSRLKGKEVESESTYGRIKTNERENQSGIGGYNRQDSAYKFFPMGINSSLLNNAMTNNSSYHSEPSSLSLSQFGSHGLLFPYQVDSHSSSGSAVPFSSSLSVPSGSQLLFGPSSATPSLFTPHAQFMANTMESDPRQSNHIQILSSTSQVIPHHPLIPSLHSINSPLRRLPTPFTSKLLDSDNNNNRQPDMGGNRS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03807 362 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Rops2g03807 362 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 292 IPR005333 GO:0003700
Rops2g03807 362 MobiDBLite consensus disorder prediction 337 362 - -
Rops2g03807 362 MobiDBLite consensus disorder prediction 1 33 - -
Rops2g03807 362 MobiDBLite consensus disorder prediction 11 26 - -
Rops2g03807 362 Pfam TCP family transcription factor 51 164 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03807 Rops-Chr2 70314921 70316907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03807 35 336 TCP Transcription Factor Family AT5G60970 40.823 2.44e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops2g03807 TCP 5.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03807 - - gmx:100804574 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03807 2 70314921 70316907 Rops10g00432 10 11830960 11832865 PCT