Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops2g03806 | ATGGCAGCAAAGCTCCTGCATTCTTTAGCAGATGATAACCCAGATTTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCATCATACTATTACTGCTCGCCGCGTTAGCCGGAAGAGGCTTCCTCCTGGTAATTCCCACTTCAATTATGACAGCCAGGAAAGAGATTCTAATAGCACACACCAACGACAAACAGCAGCTGATATGAGAACAAACAAGGTTGTGACTGAAAAACAAAGAATTTCAACAAAATCATCAAGAGCCTCATTCACTTCTTGTTCATCATCAATGTCCTCTCTGGACTGTAATGCTCAAGGAGATGCTCCCCTTGACCGGATTATTTTTCCTGAAACTCCTATGAGGGACCCAGTTGTGAACCAAAAAAGAACCTCTACCCATTTAGGATGTCACTCCCTTGACCTGAGGGATGTGGTGAAGGACTCTATGTATAGAGAGGCCAAAGGACTATCCAAAAAGGAAGCTACCATTCGTGCTATGAAGCACAAAGATTCCCCAAGACCTCTTCAGCTGTCCAAATCAGTTGATGGTAAACAAAGTGTGCCTATTGATCTAAAGGAGTGTACTCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGCAATATGGTGAAGCTAAAGAACTTCCAAGATTATCATATGAAGTAAAGGATGGACATTGGCATTCCATCTTGAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAGGAATGAGTCGCTTATCTTTTGAATCACATGAGACCATAAAATGCCCACCAAAGCTAAAAGATCTTCCTAGACTTTCACTGGACAGTAGGGAAGTTTCATGGCACACATACAGCTCTGATTCAAAAGCCAGTCACCTCTCTAGAAATTTCATCACTGGTGGTGCCTCTACCTCAGATGACAAAGTCTCTAGTCTAAGACAGTCTTCAGCAACCCAAAGCCGGCCGCCTAGTGTTGTCGCAAAATTAATGGGCTTGGAAGCATTGACAGAATCCTACTCGGCCAGTGATACTCAGTCAAGTTTGAGTGAAACTGGCTCAACTCAAAGTAATGGTCAGTTTTCAGAAATTGGACTCACCAGGCCACTCCAAGTTTCTAGCTCCCTGAAAAACTCATTGAATGATCCCACTTCCCCACAGTGCAAGAATCCTGATTTGGTTGTGAAACCAATCTCAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAAGCAGCATAATGAAATCCGAAGCTCTCAGAAACCAAGTTCCAGGGCTATAAAAGCTCCAACAAGAACACCAGATTCATTTCCTTCAGTTTATGGTGAGATTGAGAAGAGATTGAAGGATCTTGAATTTAAACAATCTGAAAGGGATCTCAGAGCACTCAAATGGATACTGGAAGCAATGCAACTAAAGGGGATGTTGGAGACCAAAAAAGAAGAACAAGCTTCAAATGTTGCTGGGAATCAAAGATGCTATGAACCAAAACTGAGTCTAATTCAGAATTCTGTGTCTGTGAGGCAACAAACAATCAGGGGATCTGACTCAGAAAGGACTTCTGAATCTCCAATTGTGATCATGAGACCAGCAAAACTTGTAAAGAAAACTGGAATTTCTGCTTATTCAGTCATTCCAGTTGGTGGACTTTATGATTCCCATAAACTCCACAGTGGTGTGCATTCACATAAGAAAAAGGGGACAGCTTCTAGTCAAATGGAAAAAGATCAGTCTCCTAGAAATAGTCACAGGGATGCTTCAACCAGTTCCAGTGATAAGAAAGCACAATCTCAACCAAGGTTTCAACAAGTTCCAAAAGAAAATAGTCCAAGTTCAGTAAAGAATTCAGGATCTGTGAGCCCAAGAAGGAAACAGAAGAAGTTAGAGTTGGAGAGGCGATCTCGCCCACCTACCCCGCCATCAGATTCAAATAAACCCAGAAGGCAATCCAGTAAGCAGACAACAGAATCAGATTATCCTGGTAGGAAACTGAGGCCCAAAGTCCCTAATTCACAGCACGGTGATGACCAACTTAGTGATATAAGCAATGAATCAAGAAGTTTAAGTTTCCAAGGGGATGAAATATCTATGCAATCAGATAGTACTACTGTCGAGTCAAAGATGGATATGGAAGTCACCAGCACTTTACAATCCGCTGAAATTATTGATAGCCAAAGCCCATCCATGAAGACAATTGAGCAGTTTGTTTCAGGATCAACGAAGAAGAAATCAGCTCTGAGGTTGGATGAGGATGAGTCTATTGCAGAACTTGCAACAGATGCCCCAGATCATCCAAGCCCTATTTCAGTTCTTGATGTCTCAGTATACAAAGATGATTTGCCATCTCCTGTAAAGCTTATATTCAATGCTCCCAAAGCCAGTGATGCTCAAGAATCTGAAGAAAACAAGAATACAGATCAGTGGGACCCCGCAGATAGCCTTTCAGTTAACAGCACAGGATCTGGAGAGATCAACCGCAAGAAATTGCAAAGTATAGATCACCTTGTTGAGAAGCTTAGACGGCTAAACTCAAGTCATGACGAAGATAGAATCGACTACATAGCTTCCCTTTGTGAAAACACAAATCCAGACCACAGATACATAACCGAAATACTATTAGCTTCAAGTCTACTACTCAAAGATCTGAGTTCTGAATTGTTGACATTTCAACACCACTCATCAGGTCATCCCATTAACCCCGAGTTATTCCTTGTGTTGGAACAAACCAAGGTAAATAGTTTGCTTTCAAAAGAAGAAAACATCCTTGGAAAAGCTGCTCACTTGAAGCTAAATACAGAGAAGTTTCACAGGAAACTAATATTTGATGTTGTGAATGAGATTCTTGGTGCAAAATTAGGCTCTTCTCCTGAGCCATGGTTGAAGCATAATGGACTCACAAAGAAAATTCTCAGTGCACAAAAGCTTCTTAAAGAACTGTGCTTTGAGATAGAAAAAATTCAATCAAAGAAGCCACAATGCAGTTTAGAAGATGAAGGAGATGGACTGAAAAGTATGTTATGGGAAGATGTGATGCATCGCTCAGAAAGCTGGACAGATTTCCATTGTGAAATACCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTAGTTGATGAGATTGTAATTGGTGAAGCAGCCAAGTTACAAGTCAGGTCAGGTAGGCTCAGCAAGCTATTTGGAAAGTAG | 3189 | 0.4158 | MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHTITARRVSRKRLPPGNSHFNYDSQERDSNSTHQRQTAADMRTNKVVTEKQRISTKSSRASFTSCSSSMSSLDCNAQGDAPLDRIIFPETPMRDPVVNQKRTSTHLGCHSLDLRDVVKDSMYREAKGLSKKEATIRAMKHKDSPRPLQLSKSVDGKQSVPIDLKECTRVLAKLREAPWQYGEAKELPRLSYEVKDGHWHSILKDAPRFSYDGRGMSRLSFESHETIKCPPKLKDLPRLSLDSREVSWHTYSSDSKASHLSRNFITGGASTSDDKVSSLRQSSATQSRPPSVVAKLMGLEALTESYSASDTQSSLSETGSTQSNGQFSEIGLTRPLQVSSSLKNSLNDPTSPQCKNPDLVVKPISSSRFPIEPAPWKQHNEIRSSQKPSSRAIKAPTRTPDSFPSVYGEIEKRLKDLEFKQSERDLRALKWILEAMQLKGMLETKKEEQASNVAGNQRCYEPKLSLIQNSVSVRQQTIRGSDSERTSESPIVIMRPAKLVKKTGISAYSVIPVGGLYDSHKLHSGVHSHKKKGTASSQMEKDQSPRNSHRDASTSSSDKKAQSQPRFQQVPKENSPSSVKNSGSVSPRRKQKKLELERRSRPPTPPSDSNKPRRQSSKQTTESDYPGRKLRPKVPNSQHGDDQLSDISNESRSLSFQGDEISMQSDSTTVESKMDMEVTSTLQSAEIIDSQSPSMKTIEQFVSGSTKKKSALRLDEDESIAELATDAPDHPSPISVLDVSVYKDDLPSPVKLIFNAPKASDAQESEENKNTDQWDPADSLSVNSTGSGEINRKKLQSIDHLVEKLRRLNSSHDEDRIDYIASLCENTNPDHRYITEILLASSLLLKDLSSELLTFQHHSSGHPINPELFLVLEQTKVNSLLSKEENILGKAAHLKLNTEKFHRKLIFDVVNEILGAKLGSSPEPWLKHNGLTKKILSAQKLLKELCFEIEKIQSKKPQCSLEDEGDGLKSMLWEDVMHRSESWTDFHCEIPGVVLDVERLIFKDLVDEIVIGEAAKLQVRSGRLSKLFGK* | 1063 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 789 | 820 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 620 | 636 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 51 | 88 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 338 | 390 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 409 | 433 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 302 | 322 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 670 | 706 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 806 | 820 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 302 | 324 | - | - | |
| Rops2g03806 | 1062 | PANTHER | LONGIFOLIA PROTEIN | 1 | 1056 | IPR033334 | GO:0051513 | |
| Rops2g03806 | 1062 | Pfam | Domain of unknown function (DUF4378) | 862 | 1040 | IPR025486 | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 589 | 617 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 565 | 588 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 40 | 88 | - | - | |
| Rops2g03806 | 1062 | Pfam | DUF761-associated sequence motif | 313 | 334 | IPR032795 | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 554 | 706 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 411 | 428 | - | - | |
| Rops2g03806 | 1062 | MobiDBLite | consensus disorder prediction | 338 | 386 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops2g03806 | Rops-Chr2 | 70294321 | 70299230 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Rops2g03806 | 137 | 1061 | TRM (TON1 Recruiting Motif) Superfamily | AT1G74160 | 47.510 | 0.0 | 639 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops2g03806 | - | - | gmx:100787391 | 1383.62 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Rops2g03806 | 2 | 70294321 | 70299230 | Rops2g03806 | 2 | 70294321 | 70299230 | ECH | |
| Rops2g03806 | 2 | 70294321 | 70299230 | Rops10g00431 | 10 | 11816824 | 11823112 | PCT |