Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03803 ATGAACGGGTTAAGAGGCGAAAGAGCCCCTCTCTTAGAAGCTGAGCGTGGTGGAAGGGGAAAGAGACATGATGATGCCTCTGCAGGCCAAGTCTCAGACCTTGAACATGGTGATGCAGTGCCGGCGGCAAATGTGGGATTCTCTCGTGTGTTATCACTTGCAAAGCCTGAGGCCGGAAAGTTGGTGCTTGCGACGGTGGCTCTGTTGATTGCAGCCACGACGAGTATCTTAGTTCAAAAATTTGGTGGAAAGATAATTGACATTGTCTCAGGGGATATCCAAACTCCCGAGCAGAAAGATAGAGCATTAAAAGCTGTCAAGAGCACCATACTTGAAATTTTTCTGATTGTTATTCTCGGTTCAGTTTGTTCAGCACTTCGAGCTTGGCTTTTTTCTTCTGCCAGTGAAAGGGTTGTTGCACGGCTGAGAAAGAACTTGTTCAGCCACCTTGTAAACCAGGAGATAGCCTTCTTTGATGTTACTCGAACTGGGGAACTTTTAAGTAGGCTATCTGAAGATACACAGATCATAAAGAATGCTGCAACTACCAATCTTTCTGAGGCCCTGAGAAACTTATCAACCGCATTTATTGGTCTCAGCTTCATGTTTGCAACATCATGGCAGTTAACATTGTTGGCTTTGGCTGTTGTACCTGTTATTTCTGTTGCTGTTCGTAAATTTGGCCGTTTCCTGCGTGAACTTTCTCATAAAACTCAAGCTGCAGCAGCAGTAGCTTCTTCAATTGCGGAGGAATCCTTTGGTGCAATAAGAACAGTTAGATCTTTTGCCCAGGAAGATTATGAAATAACACGCTACTCTGAGAAAGTCGATGAGACACTTAATCTTGGACTTAAACAAGCTAAAGTTGTTGGACTCTTTGCTGGAGGCCTTAATGCGGCATCTACACTTTCAGTGATTGTAGTTGCTATATATGGAGCTAATTTGACGATCAAAGGTGCCATGTCCTCGGGTGATCTTACATCTTTCATTCTTTATAGTCTCTCGGTTGGATCTTCTATATCTGGTCTGTCAGGATTGTATACAATAGCTATGAAAGCTGCAGGTGCTAGCAGAAGGGTATTTCAACTTTTGGATCGTGCCTCATCCATGCCTAAGTCAGGAGATAAATGTCCTCTGGGCGATCAAGTTGGGGAAGTGGAACTAGATGATGTATGGTTTTCCTATCCATCACGCCCTAATCATTCAGTGCTCAAGGGCATTACAATGAAACTGCATCCAGGCTCAAAGGTTGCTCTTGTTGGTCCAAGTGGTGGTGGAAAGACTACAATTGCAAACTTAATTGAAAGATTTTATGATCCAACCAAGGGAAAGATTCTAGTGAACGGGGTTCCTCTGGTAGAAATATCGCACAGCCATTTACACAGAAAGATCAGTATAGTGAGTCAGGAGCCTACACTCTTCAACTGTTCCATAGAGGAGAACATAGCTTACGGATTTGATGGCAAAGTTAGCGCTGTTGATATAGAAAATGCAGCGAAAATGGCCAATGCTGATGAATTTATATCAAAATTCCCAGAAAAATACCAGACCTTTGTTGGAGAGCGTGGTGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCCCTGCTTATGGACCCAAAAATTCTCCTCCTGGATGAAGCCACCAGTGCCCTAGATGCTGAAAGTGAATACCTAGTGCAGGATGCTATGGATTCTATCATGAAGGGAAGGACAGTTCTAGTCATTGCTCATAGGTTATCAACTGTTAAAACTGCTAATACTGTTGCAGTTATTTCTGATGGCCAAGTAGTTGAGAGTGGCACCCATGATGAGCTTCTCAGCAAGAATGGTGTCTATACTGCATTAGTAAGGAGACAACTACAAACAACAAAAGCTGAAAGTCTGTGTGTAGCAAATCATGAATAA 1920 0.4318 MNGLRGERAPLLEAERGGRGKRHDDASAGQVSDLEHGDAVPAANVGFSRVLSLAKPEAGKLVLATVALLIAATTSILVQKFGGKIIDIVSGDIQTPEQKDRALKAVKSTILEIFLIVILGSVCSALRAWLFSSASERVVARLRKNLFSHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLSFMFATSWQLTLLALAVVPVISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAQEDYEITRYSEKVDETLNLGLKQAKVVGLFAGGLNAASTLSVIVVAIYGANLTIKGAMSSGDLTSFILYSLSVGSSISGLSGLYTIAMKAAGASRRVFQLLDRASSMPKSGDKCPLGDQVGEVELDDVWFSYPSRPNHSVLKGITMKLHPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILVNGVPLVEISHSHLHRKISIVSQEPTLFNCSIEENIAYGFDGKVSAVDIENAAKMANADEFISKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVAVISDGQVVESGTHDELLSKNGVYTALVRRQLQTTKAESLCVANHE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03803 639 Gene3D ABC transporter type 1, transmembrane domain 113 383 IPR036640 GO:0005524|GO:0016020
Rops2g03803 639 Pfam ABC transporter 404 554 IPR003439 GO:0005524
Rops2g03803 639 FunFam ABC transporter B family member 25 113 383 - -
Rops2g03803 639 CDD ABC_6TM_AtABCB27_like 64 360 - -
Rops2g03803 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 386 623 IPR003439 GO:0005524
Rops2g03803 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 624 IPR027417 -
Rops2g03803 639 CDD ABC_MTABC3_MDL1_MDL2 386 624 - -
Rops2g03803 639 Gene3D - 384 631 IPR027417 -
Rops2g03803 639 SMART AAA_5 413 607 IPR003593 GO:0016887
Rops2g03803 639 PIRSF ABC_prm/ATPase_B 14 639 - -
Rops2g03803 639 SUPERFAMILY ABC transporter transmembrane region 49 366 IPR036640 GO:0005524|GO:0016020
Rops2g03803 639 MobiDBLite consensus disorder prediction 1 33 - -
Rops2g03803 639 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Rops2g03803 639 FunFam ABC transporter B family member 25 384 626 - -
Rops2g03803 639 Pfam ABC transporter transmembrane region 61 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g03803 639 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 43 630 IPR039421 -
Rops2g03803 639 MobiDBLite consensus disorder prediction 9 31 - -
Rops2g03803 639 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 352 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03803 Rops-Chr2 70207119 70212986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03803 114 624 Calmodulin-binding Proteins AT2G36910 39.884 5.31e-102 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03803 - - gmx:100810510 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03803 2 70207119 70212986 Rops2g03803 2 70207119 70212986 ECH