Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03802 ATGATAGAGAGAGCATTGAGAAATGGCTCTTTTCATAAAAAAATCGCATGTCCAATTACCAAACAACCCCTTCTTTCAGATTGCACTGATCTTACTCCAAACCACACCCTTCGTAGATTGCTTCAAGCATGGTGCACCATGAACGCTTCTCAAGGTGTTGAACGAATTCCAACTCCTAAGCCACCAGTCAACAAAACCATGATACAGAAACTCCTCAAGGACGCTTCTAAATCTTCTCAGTTGCAGATCCAATGCTTCCAAAGACTCAAATCCATCGCTTCTGAGAGTGAGACAAATAAACGCTGCATGGAAGCTTATGGTGTTGTTGAGTTCCTAGCATCAATTGTAACTAGCAACACCAAAGCTTCACTTTCCACAGATGATGATGATGATATTGATGGGTTTGACTTGAAAACAGGTGCAGGAGATGAAGCATTAAGCATCCCCTTTAGTCTCCATTTATCAGAAGAGGGTCTTAAGACTCTCTTAGCTTTCAAAAATGGAGAATTTATGGATTCCTTGATGAGAATCATGCAAAAGGGAAGTTCCTAG 552 0.4094 MIERALRNGSFHKKIACPITKQPLLSDCTDLTPNHTLRRLLQAWCTMNASQGVERIPTPKPPVNKTMIQKLLKDASKSSQLQIQCFQRLKSIASESETNKRCMEAYGVVEFLASIVTSNTKASLSTDDDDDIDGFDLKTGAGDEALSIPFSLHLSEEGLKTLLAFKNGEFMDSLMRIMQKGSS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03802 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 56 IPR013083 -
Rops2g03802 183 PANTHER WDSAM1 PROTEIN 2 182 IPR045185 GO:0061630
Rops2g03802 183 SUPERFAMILY RING/U-box 12 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03802 Rops-Chr2 70172361 70172912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03802 2 181 U-box Gene Family AT3G52450 46.392 7.81e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03802 - - gmx:100811258 223.402