Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03801 ATGTCATCATCATCAGAACTCTGCTCCCTGTTTTTCTGGCCACCTTTGTGTTTAACAACATTAACCTTCGATGTCTTTCTTGGTTTCCTTCTCCTCGTAGCCGTGTTTGGTTTCTGGCTTGTTCCTGGTGGTCTTGCTTGGGCTCTGTCCAAAGCAAGTGTTAACAAGAAAGCTCCCATTCCTGGACCTTCTGGTCTTCCTCTTCTTGGCTTAGTTTATGCTTTCTCAGGGACTTTGTCTCATAGAGTACTTTCTAAGCTTGCTGATACCTTCAAGGCCAAGCCCTTGATGGCATTCTCTGTGGGGTTTACTCGTTTTGTAATCTCCACTAACCCTGACACAGCTAAAGAGATTCTGAACAGTTCATCTTTTGCTGATCGACCTGTTAAGGAATCAGCTTATGAGCTTCTCTTTCACCGAGCAATGGGGTTCGCACCGTTTGGAGAGTACTGGAGGAACCTGAGGAGGATTTCAGCTACTCACATGTTCTCTCCAAGGAGGATTTCCTCCTTTGGAGAGTTTCGTGCCAGGATTGGAGCCCGCATGGTGAGGGAGATCAGGGGGTTGATGGAGAAGAAGGGTGAGGTGGTGGTGAGGGAAGTGTTGCATTTTGGGTCCTTGAACAACGTGACGATGAGTGTGTTTGGGAGGAGTTATGAGTTTGGTGAGGGTGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGAGAAGGGTATGATTTGCTTGGGGTGTTCAATTGGAGTGATCACTTCCCTCTTCTGCGTTGGTTGGACTTGCAAGGTGTGAGGAAGCGGTGCAGGAATCTGGTGGAAAAAGTGAATGTTTTTGTTGGGAAAATCATATGGGAGCATAGGATGAAAAGGGCCGATGAAGGTAAGATCACCATGGATGATGACAACTCTGGTGATTTTGTTGATGTGCTGCTGGATTTGGAGAAAAAGGACAGGCTTCAACACTCTGATATGGTTGCTGTTTTGTGGGAAATGATCTTCAGGGGGACTGATACAGTGGCAATCCTTCTAGAGTGGATTCTTGCTAGGATGGTTCTGCACCCAGAAATCCAAGCTAAGGCTAAAGCTGAAATTGACTCTGTTGTTGGCTCTGGCCGCACTGTGACTGATATGGATCTTCCAAACCTGCCTTACCTACGTGCCATTGTGAAAGAAACCTTGAGGATGCACCCACCAGGTCCTCTTCTTTCATGGGCCAGGCTTGCCATCCATGACACCCACATTGGTCATCACTTCATTCCAGCTGGCACTACTGCCATGGTGAACATGTGGGCTATCACTCATGACCAAGAGGTTTGGTCTGATCCAGAAATGTTCAAACCAGAACGTTTTCTGCAAGATGGTGATGTGCCAATCATGGGTTCTGATCTTAGGTTGGCACCTTTTGGTTCTGGAAGAAGGGTGTGCCCTGGAAAAGCCTTGGGCTTGGCCACTGTTGAGCTTTGGCTTGCTATGTTCCTGCAGAGCTTCACATGGTTGCCTTGTGATTCTGGTGTGGACTTGTCTGAGTGCTTGAAGCTCTCTCTTGAGATGAAACACTCTTTGGTCTCCAATGTTGTTGCACGCCCTGAACCTTGCATCCATCAGGGATGA 1602 0.4775 MSSSSELCSLFFWPPLCLTTLTFDVFLGFLLLVAVFGFWLVPGGLAWALSKASVNKKAPIPGPSGLPLLGLVYAFSGTLSHRVLSKLADTFKAKPLMAFSVGFTRFVISTNPDTAKEILNSSSFADRPVKESAYELLFHRAMGFAPFGEYWRNLRRISATHMFSPRRISSFGEFRARIGARMVREIRGLMEKKGEVVVREVLHFGSLNNVTMSVFGRSYEFGEGGDGCELEELVREGYDLLGVFNWSDHFPLLRWLDLQGVRKRCRNLVEKVNVFVGKIIWEHRMKRADEGKITMDDDNSGDFVDVLLDLEKKDRLQHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAKAEIDSVVGSGRTVTDMDLPNLPYLRAIVKETLRMHPPGPLLSWARLAIHDTHIGHHFIPAGTTAMVNMWAITHDQEVWSDPEMFKPERFLQDGDVPIMGSDLRLAPFGSGRRVCPGKALGLATVELWLAMFLQSFTWLPCDSGVDLSECLKLSLEMKHSLVSNVVARPEPCIHQG* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03801 533 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 Gene3D Cytochrome P450 48 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Rops2g03801 533 PANTHER CYTOCHROME P450 78A7-RELATED 22 525 - -
Rops2g03801 533 CDD CYP78 92 518 - -
Rops2g03801 533 SUPERFAMILY Cytochrome P450 60 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 Pfam Cytochrome P450 61 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g03801 533 FunFam Cytochrome P450 78A5 52 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03801 Rops-Chr2 70161517 70163846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03801 22 525 Cytochrome P450 AT1G74110 66.795 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03801 K20619 - gmx:100803303 815.839