Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03798 ATGGAGTCTCTCTGGTTATCAACTAAGGGTTCTCTTGTCCTCCGTGGTGGCTTCTGGGCAATGTTACTGCTTTCTTGCACCACATTCACTTCTACAGAAGCCTATGATGCACTTGATCCAACTGGCAATATAACAATCAAGTGGGATATCATAAGCTGGACTGGTGATGGCTACCTTGCTGCTGTTACAATGTACAACTTTCAACAGTATCGCCATATTCAGGCTCCTGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTAATTTGGAACATGATGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAGCACCCCACACTGTTGCAAGAAGGACCCAACAGTAGTGGATTTACTGCCTGGAACTCCTTACAACCAACAGGTCGCAAATTGTTGCAAAGGGGGAGTCTTAAACTCATGGGCTCAGGATCCGGACACTGCAGTAAGTTCATTTCAACTTACGGTCGGTTCGGCAGGAACAACAAACAAAACAGTCAAACTGCCAAAAAATTTTACTCTAAAAGCACCAGGGCCTGGTTATACTTGTGGCCCTGCAAAGATTGTGAGACCAACTAAATTTATTACCAATGACAAGAGGAGAACCACTCAGGCACTGATGACCTGGAATGTTACCTGCACCTATTCTCAATTCCTGGCTCAGAAGACCCCAACTTGCTGTGTTTCTCTCTCATCCTTCTATAATGATACAATAGTAAACTGTCCAACTTGCACCTGTGGCTGCCAAAACAAAACAGAACCTAACAGCTGTGTAGATCCAGACTCCCCACATTTAGCTTCTGTTGTGTCACCGCCGGGCAAAGCTATAAATACACCTTTAGTCCGGTGTACCAGCCATATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCCAGTATAAAGAGTACTGGAGGGTCAAGATCACAATCACAAATTTCAATTACAGAATGAACTATTCACATTGGAACCTTGTTGTGCAGCACCCAAATTTTGATAATATAACCCAGATTTTCAGCTTTAATTACAAGTCACTAACTCCTTATGTGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTATAATGATTTACTTACTTCAGCTGGACCCGTTGGTAATGTGCAGTCAGAGCTTTTGTTTAGAAAGGACAAATCAAGCTTCACATTTGATAAAGGATGGGCTTTCCCACGAAGAATTTATTTCAATGGAGACAACTGTGTAATGCCACCTCCTGATGCCTACCCATGGCTGCCAAATGCAAGTTCAAAACTAGTTTTCTCTTTACTAAGTACAGTCATAGGCACTTTATTTTCTTTGGTAGTCTTATTGACCTACCATGGAGAATAA 1368 0.4313 MESLWLSTKGSLVLRGGFWAMLLLSCTTFTSTEAYDALDPTGNITIKWDIISWTGDGYLAAVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMMGGQTTEQGDCSRFKGSTPHCCKKDPTVVDLLPGTPYNQQVANCCKGGVLNSWAQDPDTAVSSFQLTVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFITNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNKTEPNSCVDPDSPHLASVVSPPGKAINTPLVRCTSHMCPIRVHWHVKLQYKEYWRVKITITNFNYRMNYSHWNLVVQHPNFDNITQIFSFNYKSLTPYVGLNDTGMLWGVKFYNDLLTSAGPVGNVQSELLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIGTLFSLVVLLTYHGE* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03798 455 PIRSF COBRA 11 453 IPR006918 GO:0010215|GO:0016020
Rops2g03798 455 Pfam COBRA-like protein 58 221 IPR006918 GO:0010215|GO:0016020
Rops2g03798 455 PANTHER PROTEIN COBRA 24 438 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03798 Rops-Chr2 70081342 70085403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03798 4 450 COBRA Gene Family AT3G02210 73.661 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03798 - - gmx:100811581 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03798 2 70081342 70085403 Rops2g03798 2 70081342 70085403 ECH
Rops2g03798 2 70081342 70085403 Rops10g00422 10 11639316 11642756 PCT