Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03787 ATGTTTAAGTTTCAAGAGCTAATTCATAAAGACATTATGTTTCTTGTTGCTATCACCTGTGGCAATACATTTATTCTAAAGCCTTCAGAGAAGAATCCAGGCTCAATCAATATTGGAACTTCTGATGAGTTACCTTTGCCTCCAGAGAAAGCTTATCTGAAAGAAGAGCTCTCTAGAATAGATGAGAGTTGGGCTGCTGCTCGTTTTGATTCGTTACCTCGTGTTGTCCACATTTTGACATCAAAAGATCACGAAGCTGCTGCCCAATTTTTGAAGGAGCAAAGTAATGTTATTGAGGAGGTTGTGGATGAAGTAGTACTCTCTTATCACAGCGGTTTCAACAGAGCAGTCCAAAACTATTCCCAGGCACCCTGA 375 0.4027 MFKFQELIHKDIMFLVAITCGNTFILKPSEKNPGSINIGTSDELPLPPEKAYLKEELSRIDESWAAARFDSLPRVVHILTSKDHEAAAQFLKEQSNVIEEVVDEVVLSYHSGFNRAVQNYSQAP* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03787 124 PANTHER EXOCYST COMPLEX COMPONENT 4 48 122 IPR039682 GO:0000145|GO:0090522
Rops2g03787 124 Pfam Sec8 exocyst complex component specific domain 53 123 IPR007191 GO:0000145|GO:0006904
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03787 Rops-Chr2 69807741 69811656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03787 13 35 Aldehyde Dehydrogenase Gene Family AT2G14170 82.609 1.61e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03787 K06111 - gmx:100777077 145.976