Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03783 ATGCAAGGTCTCACCTTTCTCCTCCATTCTTTCATTTCTCATCAGAAGGTCTCATCTTTTAGCCAATTCTCTAGCCTCTTCCATAGCTCTTTCAGAACAAGTCAGAAGGTTTTGTCAATCAAAACAGATAAACTCGTATCTATGTTTCAAGAGATGAGCATCAACTACAAGAAGAATGCCCTTCCACGGATTGATGGTATATTTCATTCAAAGCCAAAGTATTGGGTGAACTTTCCTCAAAAGGTCCACCTACTTATTACCAAAGGAGTTCCTGCTGATAAGATGTTCAATGTGTTGGAGAATGTAAGTCTAAAAAAGGCTCTTAGTGATAGACCATTGGATGAAATAAGCAGAGTGATAGATTTCCTAGAGCCCTTTGGTGGGATCAATTTAGTTGTTAAGCAACCAATTATACTGAACAACCACCTTTATGGCCAACTCATACCCAAAATTGACATCTTTACAAAGCTTTCAGGAGGGAATCATGATGACATCAAAAAACTTTTGTTTAGTCTAGAGGATAGCCTTAGACCTAGATTGCAACTACTAAGAGTTTGTCATCTGAGTTCTAGGGAATTACTGACTTTTGTGACTAGAGGTTATGCCTTCTTTGGGCAATCCTATGAAGATGGGATTGCTCCTAAGATGGCATTGTTAAAGTCAGTCGGATATGAAGAGCACCTAAGAGAATATGCCATAGCACTTAGGTCGACTGCCAGGATTGATAAACTCGTATCTATGTTTCAAGAGATGAGCATCAACTACAAGAAGAATGCCCTTCCACGGATTGATGGTATATTTCATTCAAAGCCAAAGTATTGGGTGGACTTTCCTCAAAAGGTCCACCTACTTATTACCAAAGGAGTTCCTGCTGATAAGATGTTCAATGTGTTGGAGAAAGTAAGTCTAAAAAAGGCTCTTAGTGATAGACCATTAGATGAAATAAGCAGAGTGATAGATTTCCTAGAGCCCTTTGGTGGGATCAATTTAGTTGTTAAGCAACCAACTATACTGAACTACCACCTTTATGGCCAACTCATACCCAAATTGACATCATTACAAAGCTTGCAGGAGGGAATCATGATGACATCAAAAAACTTTTGTTTAGATAAACTCGTATCTATGTTTCAAGAGATGAGCATCAACTACAAGAAGAATGCCCTTCCACGGATTGATGGTATATTTCATTCAAAGCCAAAGTATTGGGTGGACTTTCCTCAAAAGGTCCACCTACTTATTACCAAAGGGGTTCCTGCTGATAAGATGTTCAATGTGTTGGAGAAATTAAGTCTAAAAAAGGCTCTTAGTGATAGACCATTGGATGAAATAAGCAGAGTGATAGATTTCCTAGAGCCCTTTGGTGGGATCAATTTAGTTGTTAAGCAACCAACTATACTGAACTGCCACCTTTATGGCCAACTCATACCCAAAATTGACATCTTTACAAAGCTTGCAGGAGGGAATCATGATGACATCAAAAAACTTTTGTTTAGGTATCTTAGAATTGTAAGATACTCAGAAGACAACATAACAGCAAAAACAACCTATTTGAAGTCATTCATAGACATAAGTGACAATGAAGTGTTTAAGATTATCCTGATATATCCTAGTATGATAACATATAGTCTAGAGGATAGCCTTAGACCTAGATTGCAACTACTAAGAGTTTGTCATCTGAGTTCTAGGGAATTACTGACTTTTGTGACTAGAGGTTATGCCTTCTTTGGGCAATCCTATGAAGATGGGATTGCTCCTAAGATGGCATTGTTAAAGTCAGTCGGATATGAAGAGCACCGAAGAGAATATGCCATAGCACTTAGGGCTACTGCTAGGATTGGTCTTGAAAATCTTTAG 1854 0.383 MQGLTFLLHSFISHQKVSSFSQFSSLFHSSFRTSQKVLSIKTDKLVSMFQEMSINYKKNALPRIDGIFHSKPKYWVNFPQKVHLLITKGVPADKMFNVLENVSLKKALSDRPLDEISRVIDFLEPFGGINLVVKQPIILNNHLYGQLIPKIDIFTKLSGGNHDDIKKLLFSLEDSLRPRLQLLRVCHLSSRELLTFVTRGYAFFGQSYEDGIAPKMALLKSVGYEEHLREYAIALRSTARIDKLVSMFQEMSINYKKNALPRIDGIFHSKPKYWVDFPQKVHLLITKGVPADKMFNVLEKVSLKKALSDRPLDEISRVIDFLEPFGGINLVVKQPTILNYHLYGQLIPKLTSLQSLQEGIMMTSKNFCLDKLVSMFQEMSINYKKNALPRIDGIFHSKPKYWVDFPQKVHLLITKGVPADKMFNVLEKLSLKKALSDRPLDEISRVIDFLEPFGGINLVVKQPTILNCHLYGQLIPKIDIFTKLAGGNHDDIKKLLFRYLRIVRYSEDNITAKTTYLKSFIDISDNEVFKIILIYPSMITYSLEDSLRPRLQLLRVCHLSSRELLTFVTRGYAFFGQSYEDGIAPKMALLKSVGYEEHRREYAIALRATARIGLENL* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03783 617 SMART mt_12 456 488 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 SMART mt_12 565 596 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 SMART mt_12 194 225 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 SMART mt_12 328 359 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 SMART mt_12 493 524 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 SMART mt_12 529 560 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 Pfam mTERF 409 588 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 PANTHER CGI-12 PROTEIN-RELATED 445 575 IPR003690 GO:0003690|GO:0006355
Rops2g03783 617 Gene3D Transcription termination factor 3, mitochondrial 453 605 IPR038538 -
Rops2g03783 617 Gene3D Transcription termination factor 3, mitochondrial 166 385 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g03783 mTERF 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03783 - - pvu:PHAVU_009G045200g 180.259