Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03778 ATGGAAGCCAATGATGATGAGGAACTCCATGAAGCACCCTATGCTTCTTCCTTAACACAGTACCTTCACTATCCTTCTCCATCCCAAAAACCCACCATAACCTCAAGCCTCCAAAACATGGAAACTGGAGAAAACCATTCTTTGACTCATCTTGATCCATGTCATGGTTTACATCATATTCCATTTTACTACTCCCATCTGCACCTTCCTAGCAACAGTGACAGTCCAATTCAAATCCCAGTTCATAAGTCCTCTCCCAACACATCATCAAACAGCAACAACACCAACACCAACAACAACTCTGATGAAGGAAAGGCTCTCCTTGATGACAGAAAGAAGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGCAGGTCAAGAATGAGAAAGAAGCAACAAATTGAAGTCCTGCAATATCATGTGGATCATCTGCAGGCATTGAACCATCAACTTTCCCAAAAGATCATTTACTTGTTGGAATGTAACCAACAAATCCACCAACAAAATGCTCAACTTAAAGACAAAGTTTCCTCTCTTCAAGTGGCACTCTCTGACTTGTTAGTTCCTGCTGGAAGCACTGATCTACCTCACCACATCCCTAATGCCTTCCTACCTGAGCCTTCAACTAGACCAATTACAAGTTCCAGAACATAG 654 0.422 MEANDDEELHEAPYASSLTQYLHYPSPSQKPTITSSLQNMETGENHSLTHLDPCHGLHHIPFYYSHLHLPSNSDSPIQIPVHKSSPNTSSNSNNTNTNNNSDEGKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQALNHQLSQKIIYLLECNQQIHQQNAQLKDKVSSLQVALSDLLVPAGSTDLPHHIPNAFLPEPSTRPITSSRT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03778 217 Coils Coil 162 182 - -
Rops2g03778 217 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Rops2g03778 217 FunFam BZIP transcription factor 109 160 - -
Rops2g03778 217 MobiDBLite consensus disorder prediction 104 129 - -
Rops2g03778 217 Pfam bZIP transcription factor 111 169 IPR004827 GO:0003700|GO:0006355
Rops2g03778 217 MobiDBLite consensus disorder prediction 75 129 - -
Rops2g03778 217 CDD bZIP_plant_GBF1 112 160 IPR045314 GO:0003700|GO:0006355
Rops2g03778 217 Gene3D - 110 163 - -
Rops2g03778 217 SUPERFAMILY Leucine zipper domain 111 167 IPR046347 GO:0003700|GO:0006355
Rops2g03778 217 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 42 193 IPR044521 -
Rops2g03778 217 MobiDBLite consensus disorder prediction 75 103 - -
Rops2g03778 217 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Rops2g03778 217 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 114 129 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03778 109 214 bZIP Transcription Factor Family AT5G60830 51.852 3.59e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops2g03778 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03778 - - aprc:113874797 332.413