Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03773 ATGGCACAACAAGATGCTGTTTTTGGTGCTGAGTCACCTCGGCGACGTTATGGTCTATTAAGAGATCAGGTTCAATTTGTTAAAAGAAAGGACTCTGATCGATATGAAATTGTTCCAATCCAAGATTCTTTGTCATTGGAGAAAGGGTTCTTCATAGTTATTCGTGCATGTCAGTTGTTGGCTCAGAAGAATGATGGGATCATATTAGTAGGGGTAGCAGGTCCCTCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGGTCCTTAATTTTATGCCAAGCATTGCTGTCATAACAATGGACAATTATAATGATTCTAGTAGAGTCATAGATGGAAATTTTGATGACCCCCGGTTGACGGATTATGATACTTTGCTCGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAGGTTCCGGTATATGATTTCAAGTCTAGCTCTCGCGTAGGTTACAGGACTGCTGAAGTCCCTAGCTCACGTATTGTAATCATTGAAGGCATCTATGCCTTAAGTGAAAAATTACGACCTTTGCTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTTGTCAAGCGTGTTTTGCGGGACATTCAACGTGCTGGCCAAGAGCCTGAAGAAATAATTCATCAAATTTCTGAAACGGTATATCCCATGTATAAAGCTTTTATAGAGCCCGATCTCCAAACAGCACATATAAAAATTATTAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCAGCAAGAGCTGTAACAGTAGATCAAATCAAGGCAGTTGTTGCTGCAGAGCATACTGAAACCAAAGAGGAAACATATGACATATATCTTCTACCACCTGGGGAGGACCCTGAAGCATGTCAATCATATTTGAGGATGAGAAATCGAGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTTACAGATAGTCCATTCATAATATCACCTAGAATTACGTTTGAGGTCAGCGTGCGCCTTCTCGGAGGACTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAGCAGCCATGTCTTTCATGATGATAAAGTGTCCATAAAAACTGATCGGCTGGAACAACTTAATCGCCTATATGTTCAGGTGCAAGGGAAAGATAGAAACTATGTTAAATTTGTAGCAGAGAAACTGGGGTTGGATGGTTCTTATGTTCCTCGCACTTACATTGAACAAATCCAGCTAGAAAAGCTCGTAAATGATGTGATGGCACTGCCAGATGATCTGAAGACAAAACTCAGTATAGATGATGATTTGGTTTCAAGCCCCAAAGAAGCCCTTTCCAGAGCTTCTGCAGATAGGAGAATGAAGTATCTTAGTCGTGGTATTTCACGCTCATTCTCAAATAAAAGGGACAAGATTCTGCCTAAGTTGACTAAACTTGCTATAAATAACAGAATATTTGATGGGAGAGCTCTAGAATCACCTGCACCGGTTGCTAACCAAGGAGTCATCACTCAACTTTCTGATCAAATTTCCACATTAAATGAAAGAATGGATGAGTTCACCTCCCGGATTGAAGAGCTGAATTCAAAGTTTGCTGTCAGAAAAGTTTCAGCCAGTCAACAAAACTTGGCTTTACAGGCTGAGGCCTGCAATGGCTCTGGCCCCACTTCTCTCTTTGTATCTGGATTAGGCAATGGTTCATTGACTGGATCATTGCTACCTAATTCTTCATCATCCTCTCAACTGGCTAGAGAGTCACCCCTGATGGAAGAGGTATTACTTGTGGCACGAGGACAACGTCAAATCATGCATCAACTAGACACACTGAGCAATCTTCTGCATGAATACTTTGGAGAAAGGTCACGACAGGGAAGAATGGATCAGACAGGCAGAATGCGTGACGTTGAATCCGTTGCCATCCCCTTGGTTCTGACTGTGGCCATTGGCGCTGTTGGAGTGTTCTTGTTCAAGGGTTGGACATCTCAAAAATAA 1989 0.4193 MAQQDAVFGAESPRRRYGLLRDQVQFVKRKDSDRYEIVPIQDSLSLEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPVYDFKSSSRVGYRTAEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARAVTVDQIKAVVAAEHTETKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSIKTDRLEQLNRLYVQVQGKDRNYVKFVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKTKLSIDDDLVSSPKEALSRASADRRMKYLSRGISRSFSNKRDKILPKLTKLAINNRIFDGRALESPAPVANQGVITQLSDQISTLNERMDEFTSRIEELNSKFAVRKVSASQQNLALQAEACNGSGPTSLFVSGLGNGSLTGSLLPNSSSSSQLARESPLMEEVLLVARGQRQIMHQLDTLSNLLHEYFGERSRQGRMDQTGRMRDVESVAIPLVLTVAIGAVGVFLFKGWTSQK* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03773 662 PANTHER URIDINE KINASE 19 425 - -
Rops2g03773 662 Gene3D - 256 415 - -
Rops2g03773 662 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Rops2g03773 662 Gene3D - 68 247 IPR027417 -
Rops2g03773 662 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Rops2g03773 662 Coils Coil 502 529 - -
Rops2g03773 662 Pfam CYTH domain 272 406 IPR023577 -
Rops2g03773 662 CDD UMPK_like 69 241 - -
Rops2g03773 662 PRINTS Uridine kinase signature 226 239 - -
Rops2g03773 662 PRINTS Uridine kinase signature 134 149 - -
Rops2g03773 662 PRINTS Uridine kinase signature 67 84 - -
Rops2g03773 662 PRINTS Uridine kinase signature 190 200 - -
Rops2g03773 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 238 IPR027417 -
Rops2g03773 662 SUPERFAMILY CYTH-like phosphatases 262 409 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03773 Rops-Chr2 69574358 69585639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03773 69 323 PRT Gene Family AT5G40870 25.379 1.86e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03773 K00876 - gmx:100803122 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03773 2 69574358 69585639 Rops2g03773 2 69574358 69585639 ECH