Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g03762 | ATGGCTGGGGGAAGAAGGAGGAGGCATCACTTCAGCAAAATCCATGCATTCACATGTGGGAAAGCTTCCATGAAAGATGAACATTCACTTATAGGAGGCCCTGGTTTCTCAAGGAAAGTCAATTGCAATGACCCTGAACGTTCTATGGCGAGTCTTTTGAATTATGGTGACAATTATGTCAGAACTACTAAATATACATTAGCCACGTTCATCCCAAAGTCCTTGTTTGAACAATTCAGAAGGGTTGCCAATTTTTACTTCCTAGTTTGTTCAGTTTTGTCTTTCTTTCCTGTTTCTCCTTACTCAGCCGTTAGCAATGTTATTCCTCTAGTGGTTGTGGTTGCTGCTACGATGGCCAAAGAGTTCATCGAGGATTTTAGGAGGAAAAAACAGGATATAGAGATGAATAACAGAAAAGTTAAATTACATCGTGGAGATGGCGTTTTTGACTATTCTAAATGGAGGGATTTGAAAGTTGGAGACATAGTGAAGGTGGAAAAAGATGAATTTTTCCCTGCTGATCTCATCTTACTCTCTTCAAATTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGCGAAACAAATCTTAAACTAAAACAAGCACAGGAAGGAACTTCAAAGTTGCAAGAAGACTCAAGCTTTCAAAATTTCAAGGCTGTCATCAAATGTGAAGATCCAAATGCAAATTTGTACACATTTATAGGCAGTATGGAGCTTGAGGATCAACAGTATCCTCTTGCACCTCAGCAGCTACTGCTTAGGGACTCTAAGCTGAGGAACACAGATTTTATCTATGGTGCTGTAATCTTTACTGGTCATGATACAAAGGTTATGCAGAATTCAACAGATCCTCCATCCAAGAGAAGCAAAGTTGAGAGACGGATGGATAAGATTATCTACTGCCTGTTCTTTCTCCTAATTCTGGTTTCTTTCATTGGGTCCATATTCTTTGGGATTACAACAAAAAGGGACCTTAAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCAAAATTTTCTATGACCCAAGTAAAGCAGCAGTTGCAGCTCTTCTGCATTTCTTGACAGCACTTATGTTGTATAGTTACTTCATTCCGATTTCCTTGTATGTCTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTTATCAACCAGGATGTGCACATGTATTATGAGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAAACAGGAACTTTGACCTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCCGGGACTGCTTATGGACGAGGAGTTACAGAAGTTGAGAGAGCTCTATCTCAGAGAAAAGAATCACCTTTTGGTCAAGGGTCGAAAAAGACTGCTGAAACAAAGTCATCCATTAAAGGGTTTAACTTTACGGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAACCCAATGCTAAGGTACTCCAAAACTTCCTGCGGTTGTTGGCTGTATGCCATTCTGCAATCCCTGATGTTGATGAAGAAACTGGTAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCGGCCTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAATTTTACGAAAGGACACATACAACTATTTCACTGCACGAATTCGACCCCACATCAGGCAAGAAAACTGAAAGGTCCTACAAACTGTTAAATGCATTAGAGTTTACTAGTGAAAGGAAGAGGATGTCTGTAATTGTAAGAGATGAGGAAGGGAAGCTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACGACTTGCAAAGGATGGAAGGGAGTTTGAAGAGAAGACTAAGCAGCACATTAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATAATTGCATATCGTGAACTTCATGAGGAAGAGTACAATCAATTTAATAAAGAATTAACAGAGGCCAAGAACATAGTGAGTGCTGATCAGGAGCAGATTGTTGAGGAAATAGCACAAAGTATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAGGACAAGCTACAAGATGGGGTTCCTGAATGCATTGACAAGCTAGCACAGGCTGGGATTAAGCTATGGGTTTTGACCGGTGATAAAATGGAGACAGCAATTAATATTGGATTTGCTTGTAGTTTACTCAGACAAGGAATGAAACAAATTATAATTAATTCAGATACCCCAGAAAACAAATCATTGGAGAAAATGGAGGACAAGTCTGCTGCTGAAAAGGCAATCAAGGCAAGTGTTGTTCAACAACTAAGGGAGGCAAAGGCATTACTTTCTACATCAGATGAAAACTTTGAGGCATTAGCTCTGATCATTGATGGGAAGTCTCTTACTTATGCACTAGAAGATGATGTAAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCAAAGCAAAAAGCTCTTGTTACAAGACTGGTTAAGATAAGAACTGGTGGTACAACTCTTGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGGATTGGTATCAGTGGTGTCGAAGGAATGCAGGCTGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTGGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCTCATCAATGATCTGCTACTTCTTTTACAAGAATATCACCTTCGGCTTCACTCTATTCTTCTTTGAGATGTATGCCTCATTCTCAGGGCAAGCTGCATACAATGACTGGTTCCTGTCATTTTATAACGTATTCTTCACTTCGCTCCCGGTGATTGCTTTGGGAGTGTTTGACCAGGATGTCTCTTCCAAATTATGTCTCAAGTTTCCATTATTATATCAAGAAGGTGTGCAAAACATCCTATTTAGCTGGAAAAGAATCCTTGGTTGGGCATTCAATGGTGTTTCAAGTTCTGCCATTATATTCTTCTTTTGCATTCGCGCCATGGAGCATCAAGCATTCCGTAAAGGTGGTCAAGTTGTTGGGCTGGATGTTCTTGGAGCCACCTTGTACACTTGTGTTGTGTGGGTGGTGAATTGCCAAATGGCTTTATCTATCAGTTACTTCACTTACATACAACACATATTCATCTGGGGGAGCATTCTAATCTGGTATTTATTCCTCCTTGCATATGGAGCCATTGACCCCACCCTTTCCACCACTGCTTATAAGGTCTTCATTGAAGCTCTTGCACCATCTCCATCTTATTGGTTTGTCACTTTGCTTGTTCTTATGGCTTCCCTCCTTCCATATTTTGCCTATACTTCCATCCAAATTCGTTTCTTCCCTATGTATCACCAAATGATACAATGGATAAGAAAGGATGGGCAAACAAATGATCCAGAATACTGTAATGTGGTGAGACAGAGATCAATAAGACACACAACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAGACGTATTGATGCATCCAAACATTCCGAAGTATCCAGATGTTTTGAAGTATCCAAACGTTCTGAAGCATCCATATCTATACCTTTTGAAGGGAACTCTGGGAGGGAAACAATGACCAGATAA | 3654 | 0.4015 | MAGGRRRRHHFSKIHAFTCGKASMKDEHSLIGGPGFSRKVNCNDPERSMASLLNYGDNYVRTTKYTLATFIPKSLFEQFRRVANFYFLVCSVLSFFPVSPYSAVSNVIPLVVVVAATMAKEFIEDFRRKKQDIEMNNRKVKLHRGDGVFDYSKWRDLKVGDIVKVEKDEFFPADLILLSSNYDDAICYVETMNLDGETNLKLKQAQEGTSKLQEDSSFQNFKAVIKCEDPNANLYTFIGSMELEDQQYPLAPQQLLLRDSKLRNTDFIYGAVIFTGHDTKVMQNSTDPPSKRSKVERRMDKIIYCLFFLLILVSFIGSIFFGITTKRDLKNGRMKRWYLRPDDTKIFYDPSKAAVAALLHFLTALMLYSYFIPISLYVSIEIVKVLQSIFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVERALSQRKESPFGQGSKKTAETKSSIKGFNFTDERIMNGNWVKEPNAKVLQNFLRLLAVCHSAIPDVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLHEFDPTSGKKTERSYKLLNALEFTSERKRMSVIVRDEEGKLLLLSKGADSVMFERLAKDGREFEEKTKQHISEYADSGLRTLIIAYRELHEEEYNQFNKELTEAKNIVSADQEQIVEEIAQSIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPENKSLEKMEDKSAAEKAIKASVVQQLREAKALLSTSDENFEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKIRTGGTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFFEMYASFSGQAAYNDWFLSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNILFSWKRILGWAFNGVSSSAIIFFFCIRAMEHQAFRKGGQVVGLDVLGATLYTCVVWVVNCQMALSISYFTYIQHIFIWGSILIWYLFLLAYGAIDPTLSTTAYKVFIEALAPSPSYWFVTLLVLMASLLPYFAYTSIQIRFFPMYHQMIQWIRKDGQTNDPEYCNVVRQRSIRHTTVGFTARLEASRRIDASKHSEVSRCFEVSKRSEASISIPFEGNSGRETMTR* | 1218 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g03762 | 1217 | Pfam | Cation transport ATPase (P-type) | 514 | 618 | - | - | |
Rops2g03762 | 1217 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 884 | 1134 | IPR032630 | - | |
Rops2g03762 | 1217 | SUPERFAMILY | HAD-like | 419 | 911 | IPR036412 | - | |
Rops2g03762 | 1217 | Gene3D | - | 115 | 286 | - | - | |
Rops2g03762 | 1217 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 39 | 1147 | - | - | |
Rops2g03762 | 1217 | FunFam | Phospholipid-transporting ATPase | 116 | 286 | - | - | |
Rops2g03762 | 1217 | SFLD | C1.7: P-type atpase like | 406 | 907 | - | - | |
Rops2g03762 | 1217 | SUPERFAMILY | Calcium ATPase, transduction domain A | 139 | 284 | IPR008250 | - | |
Rops2g03762 | 1217 | Coils | Coil | 649 | 669 | - | - | |
Rops2g03762 | 1217 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1016 | - | - | |
Rops2g03762 | 1217 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 426 | 432 | IPR018303 | - | |
Rops2g03762 | 1217 | Gene3D | - | 522 | 666 | IPR023299 | GO:0000166 | |
Rops2g03762 | 1217 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
Rops2g03762 | 1217 | PRINTS | P-type cation-transporting ATPase superfamily signature | 742 | 752 | - | - | |
Rops2g03762 | 1217 | PRINTS | P-type cation-transporting ATPase superfamily signature | 856 | 875 | - | - | |
Rops2g03762 | 1217 | FunFam | Phospholipid-transporting ATPase | 534 | 692 | - | - | |
Rops2g03762 | 1217 | Pfam | Phospholipid-translocating ATPase N-terminal | 40 | 105 | IPR032631 | - | |
Rops2g03762 | 1217 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 50 | 1134 | IPR023298 | - | |
Rops2g03762 | 1217 | NCBIfam | HAD-IC family P-type ATPase | 822 | 939 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Rops2g03762 | 1217 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 491 | 693 | IPR023299 | GO:0000166 | |
Rops2g03762 | 1217 | NCBIfam | phospholipid-translocating P-type ATPase | 55 | 1141 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326 | |
Rops2g03762 | 1217 | Gene3D | - | 688 | 896 | IPR023214 | - | |
Rops2g03762 | 1217 | FunFam | Phospholipid-transporting ATPase | 692 | 896 | - | - | |
Rops2g03762 | 1217 | SFLD | p-type atpase | 406 | 907 | IPR044492 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g03762 | Rops-Chr2 | 69475763 | 69482441 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g03762 | 1 | 1179 | Primary Pumps ATPases | AT1G68710 | 69.647 | 0.0 | 1799 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g03762 | K01530 | - | gmx:100799312 | 2144.01 |