Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03753 ATGACTTCTTCTACTCATGTTCCGACGGATAATGAAGCCGATGGACAGCAGCAGTCAGAATCACAGATGCAGCCTTTATCTGCAGATGGAGTTTCTCATGTAGGTATCGATACTCATAATGTTCAGTGTGCAGCACCTCCACAGCTTGGAACTGAGCATGCCATGGCACCACCTGCTTACCCATATCCGGATCCATACTACAGAAGCATCTTTACTCCTTATGATGCACAACCTGATCCCCCACATCCTTGGTGCTTATTCATCGCTGGCTCTTATGATCATCACACTAATGTTTGGGGCACTAACACCGCCCAGGTGGTGGTGAATTTTAAAATGCATGGGAATGTTTATAGGACTGCCATGTCCACTTTGTCAACTTCTCACATGCTTATAGCTGCTGGAACTGAGGAGGTCCAAGTTCGCCTCTGTGATATTGCTTCTGGGGCATTTGCTCACACTTTGTCTGGTCACCGGGATGGAGTAAATGGCTGTTGA 495 0.4707 MTSSTHVPTDNEADGQQQSESQMQPLSADGVSHVGIDTHNVQCAAPPQLGTEHAMAPPAYPYPDPYYRSIFTPYDAQPDPPHPWCLFIAGSYDHHTNVWGTNTAQVVVNFKMHGNVYRTAMSTLSTSHMLIAAGTEEVQVRLCDIASGAFAHTLSGHRDGVNGC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03753 164 MobiDBLite consensus disorder prediction 1 28 - -
Rops2g03753 164 SUPERFAMILY WD40 repeat-like 86 163 IPR036322 GO:0005515
Rops2g03753 164 Gene3D - 74 164 IPR015943 GO:0005515
Rops2g03753 164 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-8 85 162 IPR042238 GO:0006283
Rops2g03753 164 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03753 Rops-Chr2 69371274 69371917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03753 1 85 CCAAT-HAP2 Transcription Factor Family AT1G30500 41.379 7.00e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03753 K10570 - csin:114305719 140.198