Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03737 ATGTATTACTCAAATAGCTCCCTCAACGGCAATAACCTAATCTCTTACCCTAACCAAGCATTTTCCACAGGGCCTGTTTCCTTTGAAAGCAACCCTTCTTCAAAAGATGAAAGCAATTGCCCCTTTCCTCTTCCTCCTCCTTTGTCCTTTTTTCCTTTCCATTCTTCTCCCTTTGAAGACAACCAATTCTTCCTAGAACAACACTATGATTACTCAATTCTACCTGAGGTTGATTTAAACATGGAGGCTTCGATTAACACCAAGATTCCTGAACAGGTCCCAAGAAAAAGATCTAGCAAGAGAGATCGGCACAGTAAGATCAAGACAGCTAGAGGACTAAGGGATCGGAGAATGAGATTGTCCCTTGAAGTTGCAAAGAAGTTTTTTGGTCTCCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACTGTGGAGTGGTTACTAAACCAAGCAAAAGTTGAAATCAAACAAGTTGCAAGAGAGAAAAATCATCATCATCAAAGTTGTAGCAGTGTTGGTGCCAAGAGTGCATCTTCAACTTCGGAATGTGAAGGAGTTTCTGGCTTGGACGAAGTTGTAGTGAGTGGAAATCAAGAGCAAGAAGGGGAGCCACAAGTGAAGAGAAGAATGATCAAGCCTTCTAGAAAGAGTGCATTCAATCCTATTGGTAGAGAAAAGGCAAGAGAAAGGGCAAGAGACAGAACAAGAGAGAAGTTGAGGCAAAACCTGAACCTATTGAGATCTTGGAATCCCCTTGAAACGGTGGAAGAATCTGTACATCAGAGTCAAAGCGTGAATCCCTCCATGGATGTGCTGGCTGGGGCTGAAGAACCAACTTCTCACTCAAAGGACCATTCAGGAACCGTACATGAAGATTCTTTGTTGATTATGAGCCCAACTATGATGTTCAATTATAACTCAGGAATCCCTCAAGAACATCAATTTGGAGAATTTCAGTCCTTGGGAAAACCTTGGGAGGCCTACAACAATCGCATCTAA 999 0.4224 MYYSNSSLNGNNLISYPNQAFSTGPVSFESNPSSKDESNCPFPLPPPLSFFPFHSSPFEDNQFFLEQHYDYSILPEVDLNMEASINTKIPEQVPRKRSSKRDRHSKIKTARGLRDRRMRLSLEVAKKFFGLQDMLGFDKASKTVEWLLNQAKVEIKQVAREKNHHHQSCSSVGAKSASSTSECEGVSGLDEVVVSGNQEQEGEPQVKRRMIKPSRKSAFNPIGREKARERARDRTREKLRQNLNLLRSWNPLETVEESVHQSQSVNPSMDVLAGAEEPTSHSKDHSGTVHEDSLLIMSPTMMFNYNSGIPQEHQFGEFQSLGKPWEAYNNRI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03737 332 ProSiteProfiles TCP domain profile. 100 158 IPR017887 -
Rops2g03737 332 ProSiteProfiles R domain profile. 221 238 IPR017888 -
Rops2g03737 332 MobiDBLite consensus disorder prediction 91 112 - -
Rops2g03737 332 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 86 329 IPR005333 GO:0003700
Rops2g03737 332 MobiDBLite consensus disorder prediction 163 182 - -
Rops2g03737 332 Pfam TCP family transcription factor 99 241 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03737 Rops-Chr2 69139792 69141144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03737 90 235 TCP Transcription Factor Family AT3G18550 46.988 2.18e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops2g03737 TCP 8.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03737 - - gmx:100803669 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00312 8 6085571 6087312 Rops2g03737 2 69139792 69141144 ECH
Rops10g00376 10 10516564 10518171 Rops2g03737 2 69139792 69141144 ECH
Rops2g03737 2 69139792 69141144 Rops2g03737 2 69139792 69141144 ECH