Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03733 ATGAGCTGGCGCAGGGTGTTGAAGTCAGCACAGGCTCTTGCTGCACACACTTTCCTCTTGTGTTTCACTGTCTTGCTCCTTCTCAAGCTTGATCACAAACTCTCATGTTCTTGGTGGATAATATTTTCGCCTCTTTGGATGTTCCATGCTGTTGTGGCTCGAGGAAGATTTTCATTGCCTGCGCCATCAGCCCCGCGTAATCGACATTGGGCACCATGCCATGCCGTCGTTGCAATGCCGTTGCTAATTGCATTTGAATTGCTCCTTTGTATATATCTTGAGAGCTTATCTGTTCGTGGCTTTGGAGCAGTCAATCTGAAGATTGTGTTCCTTCCCTTACTAACATTTGAAATCATTATCCTCATTGACAATTTCAGAATGTGTAGGGCACTAATGCCAGGTGATGAAGAAAACATGAGCGATGAAGCAATATGGGAGACTCTTCCTCACTTTTGGGTTGCAATCTCTATGGTGTTCTTCATTGCTGCTACAGTCTTCACACTCCTAAAACTTAGTGGTGATGTCGGTGCTCTGGGCTGGTGGGACTTATTTATTAACTTCGCTATTGCCGAGTGCTTTGCTTTTCTTGTATGTACAAAGTGGTCCAATCCGGTCATTCATAGAAATTCCAGAGAACCCAGTACATCTACTACAATCAGATATCTTGACTGGAACAGTGGTTTAATGGCTTCTTCCGAGGAAAATGAACATCAGGCGAGAATGTGCAGCCTGGAAGACATAGGAGGTCATTTCATGAAAGTACCAGTTATTTTTTTCCAGGTTCTTCTTTGTATGTATTTAGAGGGAACACCTGCTCCTGCTTCAAATATACCTTTGCCGCTTCTTTTCTCTCCCCTTTTAATACTGCAAGGTGCTGGTGTGCTGTTATCTGTATCTAAATTTGTGGAGAAACTTGTGCTTCTGCTACGAAGTGGAGCTGGTGGAGGAATATATTCTAGATTTTCTTCGAGAGCTCATGATTGCTTGGGGTTCTTGCAACATGGTTCTAGATTATTAGGTTGGTGGTCAATTGATGAAGGGAGTCGGGAAGAACAGGCGCGATTGTACCATGAGGGAGCATCTGGGTATAATACATTCTGTGGTTTTCCTCCTGAGATTGTTAAGAAAATGCCTAAAAGGGATCTTGCTGAGGAGGTTTGGAGACTCCAGGCAGCTCTTGGGGAGCAGACAGAAATTACAAAATACAGCCAACAGGAGTATGAAAGACTTAAAAATGAGAGAGTGTTATGCAGAATTTGCTTTGAAGGAGAGATTAGCATTGTATTGCTCCCGTGTAGGCACCGTGTCCTTTGCAGCACTTGTTCAGAGAAGTGTAAGAAGTGCCCAATTTGCCGTGACTCTATTGCAGAACGCTTGCCCGTCTTTGATGTTTAG 1395 0.438 MSWRRVLKSAQALAAHTFLLCFTVLLLLKLDHKLSCSWWIIFSPLWMFHAVVARGRFSLPAPSAPRNRHWAPCHAVVAMPLLIAFELLLCIYLESLSVRGFGAVNLKIVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFIAATVFTLLKLSGDVGALGWWDLFINFAIAECFAFLVCTKWSNPVIHRNSREPSTSTTIRYLDWNSGLMASSEENEHQARMCSLEDIGGHFMKVPVIFFQVLLCMYLEGTPAPASNIPLPLLFSPLLILQGAGVLLSVSKFVEKLVLLLRSGAGGGIYSRFSSRAHDCLGFLQHGSRLLGWWSIDEGSREEQARLYHEGASGYNTFCGFPPEIVKKMPKRDLAEEVWRLQAALGEQTEITKYSQQEYERLKNERVLCRICFEGEISIVLLPCRHRVLCSTCSEKCKKCPICRDSIAERLPVFDV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03733 464 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 464 - -
Rops2g03733 464 SMART ring_2 417 451 IPR001841 -
Rops2g03733 464 FunFam Kinesin-like protein KIN-7D, mitochondrial 394 462 - -
Rops2g03733 464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 392 462 IPR013083 -
Rops2g03733 464 Pfam Transmembrane Fragile-X-F protein 28 289 IPR019396 -
Rops2g03733 464 SUPERFAMILY RING/U-box 407 458 - -
Rops2g03733 464 ProSiteProfiles Zinc finger RING-type profile. 417 452 IPR001841 -
Rops2g03733 464 Pfam Zinc finger, C3HC4 type (RING finger) 414 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03733 Rops-Chr2 69084477 69092719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03733 1 464 C3H Transcription Factor Family AT1G73950 70.259 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03733 - - gmx:100791390 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03733 2 69084477 69092719 Rops2g03733 2 69084477 69092719 ECH