Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03732 ATGTCATCAAGTGCAACCATTTGGAGCTATGAAGAAGAAAAAGCATTTGAGAATGCCATAGCTATGCATTGGACTGATGAAGACTCAAAAGAGCAATGGGAAAAGATTGCTTCAGCTGTCCCTAGCAAAAATTTGGAAGAAGTGAAGCAACATTACCAGGTACTAGTAGAGGATGTAAGTGCAATAGAGGCAGGTCATATATCATTTCCAAACTATGCTTCAGAGGAAACTACATCTTCAAACAAGGATTCTCGTGGCTCTTCTAAGGCTACAAATTCAGATAAGAGATCAAATTGTAATTATGGAAGTGGGTTTTCTGGATTAGGACATGACTCCACCACACATAGTGGTAAAGGAGGCTTGTCAAGGTCATCAGAACAAGAAAGGAGAAAAGGAATTCCATGGACAGAAGAAGAGCACAGGTTATTTTTACTTGGTCTAGAAAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATTTCTAGGACTCCAACTCAAGTGGCAAGCCATGCACAAAAGTATTTCATAAGGTTGAACTCCATGAATAGAGACAGAAGGAGGTCTAGTATCCATGATATTACTAGTGTCAACAATGGAGATATGGCTAGTAATCAAGCACCAATCACAGGCCAACATAGCAGCACAATCTCTTCAAGTACAATGGCTGTAGGACAATCACTAAAGCATAGAGTTCAACCCCATATACCTGCTACTGGTTTAGGCATGTATGGAACCCCAGTTGGGCATCCTGTGGCTGCTCCTCCTGGCCATATGGCATCTGCAGTTGGAACTCCTGTCATGCTTCCTCCTGGACATCATCCACATCCACATCCTCATCCTCCTTATGTTGTTCCTCTTGCATATCCAATGGCACCTCCAACAATGCACCAATAA 906 0.4194 MSSSATIWSYEEEKAFENAIAMHWTDEDSKEQWEKIASAVPSKNLEEVKQHYQVLVEDVSAIEAGHISFPNYASEETTSSNKDSRGSSKATNSDKRSNCNYGSGFSGLGHDSTTHSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLEKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDMASNQAPITGQHSSTISSSTMAVGQSLKHRVQPHIPATGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGHHPHPHPHPPYVVPLAYPMAPPTMHQ* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03732 301 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Rops2g03732 301 PANTHER TRANSCRIPTION FACTOR KUA1 4 294 - -
Rops2g03732 301 MobiDBLite consensus disorder prediction 73 121 - -
Rops2g03732 301 SMART sant 131 181 IPR001005 -
Rops2g03732 301 SMART sant 4 58 IPR001005 -
Rops2g03732 301 ProSiteProfiles SANT domain profile. 135 183 IPR017884 -
Rops2g03732 301 CDD SANT 8 56 IPR001005 -
Rops2g03732 301 Gene3D - 133 185 - -
Rops2g03732 301 CDD SANT 134 179 IPR001005 -
Rops2g03732 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 183 IPR017930 -
Rops2g03732 301 SUPERFAMILY Homeodomain-like 7 61 IPR009057 -
Rops2g03732 301 FunFam Transcription factor SRM1 1 69 - -
Rops2g03732 301 MobiDBLite consensus disorder prediction 73 133 - -
Rops2g03732 301 Pfam Myb-like DNA-binding domain 134 179 IPR001005 -
Rops2g03732 301 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Rops2g03732 301 FunFam transcription factor MYB1R1 133 184 - -
Rops2g03732 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 131 181 IPR006447 GO:0003677
Rops2g03732 301 ProSiteProfiles Myb-like domain profile. 127 179 IPR001005 -
Rops2g03732 301 Gene3D - 1 69 - -
Rops2g03732 301 ProSiteProfiles SANT domain profile. 3 52 IPR017884 -
Rops2g03732 301 SUPERFAMILY Homeodomain-like 129 184 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03732 Rops-Chr2 69076736 69078172 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Rops2g03732 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03732 - - gmx:778049 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03732 2 69076736 69078172 Rops2g03732 2 69076736 69078172 ECH