Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03715 ATGAAGGATCCAGTGGAGGATCAAGTGATATCTAGGAGGGCTCCTCAGAAATCCTCGGAAATTAGAAGAAGGGGTAGAAGAAGAAGCCAATGCAAACAGGAGAAATTACAAGAAACAGGATTTGATTCACAACTAAGTTCATCAATCTCTTGCAAAAGTCTTGTATTTCCTGCAAGGCCTGGTTATGGCCAGCTGGGGACAAAGTGTGTGGTCAAAGCTAATCATTTCCTGGCAGATATATCAGCATCCAACTTGAGCCATTACAATGTTAAAATAACTCCTGAAATTAATTCTCGTAAAACAAGTAAAGCTATCATAGCTGAGTTAGTGAGGCTTTACCGGAACACTGAATTGGGAATGAAGCTCCCTGTTTATGATGGAGGAAGAAATCTTTACACTGCTGGCATGCTTCCATTTACATACGAAGAGTTCACCATACTATTAAGCGATGATGATGATGAGGGTAATGGTAGTACCAGGGAAAGAGAATTTCAAGTGGTAATCAAGTTTGTAGCTTGTGTTAGCATGCATCAATTACGTGAGCTTCTCAGTGGGAAACAAGTGGACACCCCACAAGAGGCGCTTACTGTCATTGACATTGTGCTGAGGGAGCTAGCTGCCCAGAGCTCCGTATCAATTGGGAGGTTTCTCTATTCTCCGGATTTAAGAAAACCACAACAGCTGGGTGGTGGCCTAGAATCATGGCGTGGTTTCTACCAAAGTATAAGGCCTACTCAGATGGGATTGTCCCTTAATATTGACATGTCATCAATGGCGTTTATAGAGCCACTCCCTGTAATTGACTTTGTTGCTCAAATTTTGGGGAAAAATGTGTACTCAAAGGCATTGTCAGATGCAGATCGTGTCAAGATTAAGAAAGCCTTAAGAGGTGTAAAAGTTGAAGTTACACATAGAGGAAGTTTTCGAAGGAAGTACAGGATAACAGGATTGACATCTCAGCCTACAAGGGAGCTCGATTTCCCTCTCGATGAGAAAATGAACATGAAATCAGTAGTTGATTACTTCCAAGAAATGTATGGATATACAATCATATATACTCATCTACCCTGCCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCCATGGAGGCATGCAAGATAGTTGGGGGTCAGAGATATACAAAAGGGCTTAACGAAAAGCAGATAACTTCTCTGCTAAAGGTCTCATGCCAGAGACCACGTGAACAAGAGACAGATATTCTACAGACAATTCATCAAAATGATTATGAGTACAATCCCTATGCAAAGGAGTTTGGTATCAGCATAGACAGCAAGCTAGCATCAGTTGATGCTCGGGTTCTTCCTGCTCCATGGTTGAAATACCACGATACTGGAAGAGAGAAAGAATACTTACCAAAAGTTGGTCAGTGGAACATGATGAACAAGAAAGTTATAAATGGAAGCACCGTACGATATTGGGCATGTATCAATTTCTCACGAAGTGTCCAAGAAAGTACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTTAGTCAGGACCCTGTGATTCCCATATATTCAGCAAGACCAGATTTGGTAAAGAAGGCCTTGAAGTATGTACATTCTGCTGCTCTAGATAAACTTGGTGGGAAAGAGCTAGAGTTGCTGATTGCTATTCTTCCAGATAACAATGGCTCTCTCTATGGCAATCTAAAGAGAATCTGCGAAACAGAACTGGGGTTGATTTCTCAGTGCTGTCTTACAAAACACGTATTCAAGATTAATAGACAGTATTTGGCAAATGTGGCACTAAAGATCAATGTCAAGATGGGAGGAAGGAACACAGTACTTTTGGATGCTCTAAGTTGGAGTATCCCATTGGTTAGTGACATTCCAACAATAATTTTTGGAGCTGATGTAACTCATCCAGAATCTGGAGAGGACCCTTGTCCGTCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCGGAAGTAACAAAGTATGCAGGATTGGTATGTGCTCAGCCTCATCGTGAAGAACTCATTCAAGATCTTTTCAAATGTTGGAAGGACCCTCATCATGGTATAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCAACCGGGCAAAAACCATTGAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTATATGAGCTTGATGCCATCCGTAAGGCTTGTGCATCTTTGGAACCTAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGGCATCACACGAGACTCTTCTCAAACAATCATGACGACAGAAACAGCACTGATAAGAGTGGGAATATCTTACCTGGTACTGTGGTGGATTCAAAGATATGTCATCCGACTGAATTTGACTTCTATTTATGCAGTCATGCAGGAATTCAGGGTACAAGTAGACCAGCTCATTATCATGTTCTATGGGACGAGAACAATTTCACTGCTGATGAGATTCAATCTCTAACCAACAACTTATGCTACACCTATGCAAGATGTACACGATCTGTTTCTGTAGTGCCTCCTGCATACTATGCTCATCTGGCAGCTTACAGAGCTCGATTCTACACTGAACCTGATGTCCCTGAAATTGCTAAATCGCGAGGTGCAAGATCAAAAGATGAGTCAGTTCGACCATTACCTGCTCTGAAAGAGAAGGTGAAGAATGTGATGTTTTACTGTTGA 2730 0.4183 MKDPVEDQVISRRAPQKSSEIRRRGRRRSQCKQEKLQETGFDSQLSSSISCKSLVFPARPGYGQLGTKCVVKANHFLADISASNLSHYNVKITPEINSRKTSKAIIAELVRLYRNTELGMKLPVYDGGRNLYTAGMLPFTYEEFTILLSDDDDEGNGSTREREFQVVIKFVACVSMHQLRELLSGKQVDTPQEALTVIDIVLRELAAQSSVSIGRFLYSPDLRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKNVYSKALSDADRVKIKKALRGVKVEVTHRGSFRRKYRITGLTSQPTRELDFPLDEKMNMKSVVDYFQEMYGYTIIYTHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQTIHQNDYEYNPYAKEFGISIDSKLASVDARVLPAPWLKYHDTGREKEYLPKVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDLVKKALKYVHSAALDKLGGKELELLIAILPDNNGSLYGNLKRICETELGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWSIPLVSDIPTIIFGADVTHPESGEDPCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGIVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYTEPDVPEIAKSRGARSKDESVRPLPALKEKVKNVMFYC* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03715 909 MobiDBLite consensus disorder prediction 1 37 - -
Rops2g03715 909 Pfam Argonaute linker 1 domain 212 261 IPR014811 -
Rops2g03715 909 CDD Piwi_ago-like 422 872 IPR045246 -
Rops2g03715 909 Pfam Argonaute linker 2 domain 406 450 IPR032472 -
Rops2g03715 909 SMART Piwi_a_2 552 873 IPR003165 GO:0003676
Rops2g03715 909 SUPERFAMILY Ribonuclease H-like 541 873 IPR012337 -
Rops2g03715 909 Pfam Piwi domain 553 871 IPR003165 GO:0003676
Rops2g03715 909 Pfam PAZ domain 287 394 IPR003100 GO:0005515
Rops2g03715 909 SUPERFAMILY PAZ domain 259 418 IPR036085 GO:0005515
Rops2g03715 909 Gene3D - 442 615 - -
Rops2g03715 909 ProSiteProfiles PAZ domain profile. 264 378 IPR003100 GO:0005515
Rops2g03715 909 SMART PAZ_2_a_3 268 400 IPR003100 GO:0005515
Rops2g03715 909 Pfam N-terminal domain of argonaute 67 202 IPR032474 -
Rops2g03715 909 CDD PAZ_argonaute_like 263 377 - -
Rops2g03715 909 FunFam Argonaute 10 442 615 - -
Rops2g03715 909 Gene3D - 622 909 IPR036397 GO:0003676
Rops2g03715 909 Gene3D paz domain 258 382 - -
Rops2g03715 909 Pfam Mid domain of argonaute 461 538 IPR032473 -
Rops2g03715 909 FunFam protein argonaute 10-like 621 909 - -
Rops2g03715 909 ProSiteProfiles Piwi domain profile. 552 873 IPR003165 GO:0003676
Rops2g03715 909 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 53 872 - -
Rops2g03715 909 SMART DUF1785_2 211 263 IPR014811 -
Rops2g03715 909 FunFam Protein argonaute-2 257 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03715 Rops-Chr2 68788494 68800640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03715 56 909 Eukaryotic Initiation Factors Gene Family AT5G43810 74.448 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03715 K11593 - gmx:100798086 1678.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03715 2 68788494 68800640 Rops2g03715 2 68788494 68800640 ECH
Rops2g03715 2 68788494 68800640 Rops10g00068 10 2340794 2351407 PCT