Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03711 ATGGATAAGAAAAGAGTGGCGGTTCCGCTTGTTTGCCACGGTCACTCGCGTCCTGTGGTTGACCTCTTCTATAGTCCTGTTACGCCTGATGGGTTCTTCCTCATCAGTGCAAGCAAAGATTCTAGTCCTATGCTCAGAAATGGAGAGACTGGAGACTGGATTGGAACATTTGAAGGGCACAAAGGGGCCGTGTGGAGTTGCTGCTTAGATACTAATGCCTTACGTGCTGCATCTGCATCCGCTGATTTCTCGACGAAATTTTGGGATGCATTAACAGGAGATGAATTGCACTCTTTTGAGCATAAGCACATTGTTCGAGCATGTGCTTTTTCTGAGGATACTCACCTTTTGCTTACTGGGGGAGTAGAGAAAATTCTCCGAATCTATGATATGAATCGGCCTGATGCACCACCCAGAGAAGTGGATAAATCCCCTGGTTCAGTCAGAACTGTTGCATGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGACATGGGAGGTGTCAGGTTATGGGATGTAAGAAGTGGTAAAATAGTCCAGACGCTTGAAACTAAGTCATCTGTGACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATTACGACTGCTGATGGTTCCACTGTTAAGTTCTGGGATGCAAATCACTATGGATTGGTGAAAAGTTACGATATGCCCTGCATGGTGGAATCAGCTTCATTGGAGCCAAAGTATGGGAACAAGTTCATTGCTGGGGGAGAAGATATGTGGGTTCATGTTTTTGATTTCCATACAGGCAATGAAATTGCATGCAACAAGGGTCACCATGGTCCTGTCCACTGTGTCCGTTTTTCTCCTGGAGGAGAATCCTATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGTCCATTGACTCATGATGACTCGGAGGTTTTATCTGCTAATGGATCAATTGAAAAGGTGAAGGTAACTGCAGATGAGGTTTCGTGCAAGATTGAGGGTTTTCACATTGCGGATGAGGGGAAATCCAAGGAAAAGGAAGAGGCAGGGGAGGCATGA 1053 0.4577 MDKKRVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSTKFWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCMVESASLEPKYGNKFIAGGEDMWVHVFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDDSEVLSANGSIEKVKVTADEVSCKIEGFHIADEGKSKEKEEAGEA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03711 350 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Rops2g03711 350 Gene3D - 9 327 IPR015943 GO:0005515
Rops2g03711 350 SUPERFAMILY WD40 repeat-like 4 301 IPR036322 GO:0005515
Rops2g03711 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 92 130 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 50 89 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 134 174 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 217 256 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 177 214 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 5 47 IPR001680 GO:0005515
Rops2g03711 350 SMART WD40_4 259 298 IPR001680 GO:0005515
Rops2g03711 350 CDD WD40 14 298 - -
Rops2g03711 350 FunFam Serine-threonine kinase receptor-associated protein 8 321 - -
Rops2g03711 350 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 7 341 - -
Rops2g03711 350 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Rops2g03711 350 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Rops2g03711 350 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Rops2g03711 350 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Rops2g03711 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03711 Rops-Chr2 68693473 68699573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03711 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 27.914 2.25e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03711 K13137 - gmx:100782712 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03711 2 68693473 68699573 Rops2g03711 2 68693473 68699573 ECH