Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03710 ATGAAAGGGGAAGTGCAGCTTCAACCTCCACAGGTTCTGCAAAACCCTAGTGATTCAGACCCTTTACTCGATAATCAAGAGGAGAATGAGTCCCCTGAAAGCTCTACTGAGATTATGAATGAGGATGACGTTGAGGCTGGTTTACTCCCTTGTTGTCGAATTTGCCTTGAAAGTGATTCCGAACCAGAGGATGAATTGATATCTCCATGCATGTGTAAAGGGACCCAACAGTTTGTCCACCGTTCATGTCTTGATCACTGGCGCTCAGTAAAGGAAGGATTTGCCTTCTCACACTGCACCACTTGCAAAGCCCAATTTCATCTTAGAGTTGAATTGTTCGAGGACAACTCTTGGCGTAAAATGAAGTTCAGACTTTTTGTGGCAAGGGATGTTTTCCTTGTTTTTTTGGCTGTACAAACTGTGATTGCTGCTATTGGGGGCTTTGCATACATCATGGACAAAGATGGGACCTTCAGGAACTCATTTGATGATGGTTGGGATAGGATACTGTCAAAGCATCCTATACCATTTTACTATTGCATTGGAGTGCTGGCCTTCTTTGTACTGATTGGATTTTTTGGTCTCATACTGCATTGCTCTTCCCTTAATACCAATGACCCCAGAATGGCTGGCTGTCAGAACTGTTGTTATGGATGGGGCATCTTGGATTGCTTTCCTGCATCAATGGAAGCATGCTTTGCCCTTGTGGTGGTTTTTGTTGTCATCTTTGCCATTCTTGGTATAGCTTATGGTTTTCTTGCTGCCACCATGGCCATTCAAAGAATTTGGCAGAGGCACTACCATATCCTCACCAAGAGGGAGCTTACAAAGGAATACATAGTAGAGGATCTCCATGGTTGTTATTTCCCTCCAAAGTTGGACCCAGAACATGAAAGTCGCTTGCAAATGCTTAAGCTTTTGTGA 924 0.4372 MKGEVQLQPPQVLQNPSDSDPLLDNQEENESPESSTEIMNEDDVEAGLLPCCRICLESDSEPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKMKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGTFRNSFDDGWDRILSKHPIPFYYCIGVLAFFVLIGFFGLILHCSSLNTNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGCYFPPKLDPEHESRLQMLKLL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03710 307 SUPERFAMILY RING/U-box 50 107 - -
Rops2g03710 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 116 IPR013083 -
Rops2g03710 307 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 6 307 - -
Rops2g03710 307 MobiDBLite consensus disorder prediction 23 39 - -
Rops2g03710 307 CDD RING_CH-C4HC3_MARCH 52 103 - -
Rops2g03710 307 Pfam RING-variant domain 52 102 IPR011016 GO:0008270
Rops2g03710 307 MobiDBLite consensus disorder prediction 8 22 - -
Rops2g03710 307 MobiDBLite consensus disorder prediction 1 39 - -
Rops2g03710 307 ProSiteProfiles Zinc finger RING-CH-type profile. 44 109 IPR011016 GO:0008270
Rops2g03710 307 SMART ringv_2 51 103 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03710 Rops-Chr2 68675297 68680176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03710 1 307 C3H Transcription Factor Family AT1G11020 79.439 2.37e-171 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03710 - - gmx:100818950 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03710 2 68675297 68680176 Rops2g03710 2 68675297 68680176 ECH