Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03709 ATGGTGTTGCCTTTGTGTGGACAAGAAGAGCTTGAATTGTCAAGAGATGGTAGTCACTATAGTCTCACTACTGGGATATTACCTTCTCTTGGAGCCAGAAGTAACCGCAGAGTTAAGCTAAGGCCATACATTATATCACCCTATGACCGCCGCTACAGGATATGGGAAACTTTCCTTGTTATTCTGGTAGTTTATACTGCTTGGGTATCTCCCTTTGAATTCGGATTCCTTAAGAAACCACAACCACCACTTTCTATTACGGATAATATTGTCAATGGATTCTTCGCTATTGATATAATTCTCACCTTCTTTGTGGCTTACATCGACAAAGCTACCTATTTGTTTGTGGATAATCCAAAACAGATTGCTTGGAAATATGAAAAAACTTGGTTGGTCTTCGATGTTATCTCTATCATTCCTTCAGAGCTTGTTCAGAAGTTATCGCCTTCTTCTATCCAAGCTTATGGGCTATTCAACATGCTTCGGCTTTGGCGTCTTCGAAGAGTTAGTGCTTTGTTTTCAAGGCTTGAGAAGGACAGAAACTTTAACTATTTTTGGGTTCGGTGTGCTAAGCTTATCTGTGTTACCCTTTTTGCTGTTCATTGTGCTGGATGCTTTTATTATTTTCTTGCTGCACATTATCATGATCCCAAAAAGACATGGATTGGAGAATCAATGGAAAATTTCCTTGACCAGAGTTTGTGGACCAGATATGTGACATCTATTTACTGGTCTATTACTACTTTAACAACCGTTGGTTATGGAGATTTACATCCAGTGAATCAAAGGGAAATGATCTTTGACATCTTTTACATGCTCTTTAATCTGGGATTAACAGCATATCTGATTGGTAACATGACCAACTTAGTTGTCCATGGCACCAGTAGAACCAGAAAATTTAGGGATACCATACAAGCTGCCTCAAGTTTTGCCCAAAGGAACCAATTACCTCCTCGTCTGCAAGACCAAATGCTTGCTCACTTGTGTTTGAAGTTTAGAACAGACTCAGAAGGGTTGCAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATCAGATCAAGCATTTCACATTATCTTTTCTATTCTCTGTTGGATAAGGTCTACTTGTTTCATGGGGTTTCAAACGACTTGCTCTTTCAATTGGTGTCAGAGATGAAAGCTGAGTATTTTCCACCCAAAGAAGATGTTATCCTGCAAAACGAAGCCCCCACTGATTTTTATATACTAGTCGCCGGTGCCGTGGACCTACTAGTTCTCAAAAATGGGGTTGAACAGGTTGTTGGAGAGGCAAAAACTGGTGATCTTTGTGGTGAGATTGGTGTGCTTTGCTATAGGCCACAGCTTTTCACAGTTCGAACAAAGCGATTAAGCCAGCTGCTGAGGCTGAACCGTACTACTTTCTTGAATATTGTTCAGGCCAATGTTGGAGACGGAACCATAATCATGAATAATCTCCTTCAGCATTTGAAAGAGCTCAACGATCCAATCATGGAGGGAGTTTTGGTGGAGACTGAGATCATGTTAGCTCGTGGTAGGATGGACCTACCAGTAAGTCTATGCTTTGCAGCAGTAAGAGGAGATGATTTGTTGTTACATCAATTGCTTAAACGAGGCTTGGATCCAAATGAATCCGACAACAATGGAAGGACAGCTTTGCATATAGTAGCATCTAAAGGAAGAGAGAACTGTGTTTTGCTTCTGTTAGATTTTGGGGCGGATCCTAATAGTAGAGATTCTGATGGGAATGTACCACTATGGGAGGCTATAGTTGGTGGACATGAATCAGTGACCAAGCTGTTGGCAGAAAATGGCGCTACGTTGCAAAGCGGTGATGTGGGTCAATTTGCATGCACTGCTGTTGAACAGAACAACCTCAACTTACTCAAAGACATAATGCGTTATGGAGGAGATATCACACTCCCAAATAGTAACCTTGGGACAACAGCTTTGCATGTTGCAGTCTCAGAAGACAATGCTGAGATTGTCAATTTCCTTTTGGATCATGGGGCTAACATTGACAAACCAGACAAGCATGGTTGGACCCCAAGAGAGCTAGCAGATCAGCAGGGACATCAAGAGATTAAAGCAATTTTTGGGTCCACTGGGGAGCTTAAGGCTCAGTCTTTTGTTGCTATTCCTGAGAGGCAGAGTAATATCAGGTTCCTTGGCAGATTCACTAGTGAGCCAACAATGCCTCCATCCCATGAAGGCTCATTTAGGGGAACAGATGGCTCTTGGAGCCAAAACCGTCCAAGGCGTAGGACCAATAACTTCCACAACTCACTCTTTGGGATAATGTCAGCAGCACATAAAGGGGGAAATGACATGCTTTTCGCTGTTAACATGAATAACAATGCAAGGAATGGTATGAAGAGTAGAGTTTGCCCAACTAGAGTAATAATTAGTTGCCCTGAAAAGGGTGAGGTTGCTGGGAAGCTGGTGTTACTACCTGGAAGCTTTAAAGAGCTACTTGAGATTGGAGCTAACAAATTTGGTATCTATCCTGCAAAGGTTGTCTGCAAGGATGGAGGTGAAATTGATGATATAGAAGTGATTAGAGATGGTGACCATCTTGTTTTTGTCAGTACTGGTGGGGTGCTAGAGTCCAATGGTCCAACACCCGCGAATGGTGTACTTCCATAG 2646 0.4218 MVLPLCGQEELELSRDGSHYSLTTGILPSLGARSNRRVKLRPYIISPYDRRYRIWETFLVILVVYTAWVSPFEFGFLKKPQPPLSITDNIVNGFFAIDIILTFFVAYIDKATYLFVDNPKQIAWKYEKTWLVFDVISIIPSELVQKLSPSSIQAYGLFNMLRLWRLRRVSALFSRLEKDRNFNYFWVRCAKLICVTLFAVHCAGCFYYFLAAHYHDPKKTWIGESMENFLDQSLWTRYVTSIYWSITTLTTVGYGDLHPVNQREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLLDKVYLFHGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVAGAVDLLVLKNGVEQVVGEAKTGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKELNDPIMEGVLVETEIMLARGRMDLPVSLCFAAVRGDDLLLHQLLKRGLDPNESDNNGRTALHIVASKGRENCVLLLLDFGADPNSRDSDGNVPLWEAIVGGHESVTKLLAENGATLQSGDVGQFACTAVEQNNLNLLKDIMRYGGDITLPNSNLGTTALHVAVSEDNAEIVNFLLDHGANIDKPDKHGWTPRELADQQGHQEIKAIFGSTGELKAQSFVAIPERQSNIRFLGRFTSEPTMPPSHEGSFRGTDGSWSQNRPRRRTNNFHNSLFGIMSAAHKGGNDMLFAVNMNNNARNGMKSRVCPTRVIISCPEKGEVAGKLVLLPGSFKELLEIGANKFGIYPAKVVCKDGGEIDDIEVIRDGDHLVFVSTGGVLESNGPTPANGVLP* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03709 881 MobiDBLite consensus disorder prediction 726 753 - -
Rops2g03709 881 FunFam Potassium channel SKOR 53 291 - -
Rops2g03709 881 ProSiteProfiles cAMP/cGMP binding motif profile. 370 472 IPR000595 -
Rops2g03709 881 SMART ANK_2a 646 675 IPR002110 GO:0005515
Rops2g03709 881 SMART ANK_2a 515 544 IPR002110 GO:0005515
Rops2g03709 881 SMART ANK_2a 581 610 IPR002110 GO:0005515
Rops2g03709 881 SMART ANK_2a 548 577 IPR002110 GO:0005515
Rops2g03709 881 PRINTS EAG/ELK/ERG potassium channel family signature 65 72 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops2g03709 881 PRINTS EAG/ELK/ERG potassium channel family signature 238 255 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops2g03709 881 PRINTS EAG/ELK/ERG potassium channel family signature 282 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops2g03709 881 PRINTS EAG/ELK/ERG potassium channel family signature 264 275 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops2g03709 881 PRINTS EAG/ELK/ERG potassium channel family signature 88 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops2g03709 881 PRINTS EAG/ELK/ERG potassium channel family signature 99 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops2g03709 881 ProSiteProfiles Ankyrin repeat region circular profile. 646 678 - -
Rops2g03709 881 Pfam Ankyrin repeats (many copies) 646 687 IPR002110 GO:0005515
Rops2g03709 881 Pfam KHA, dimerisation domain of potassium ion channel 799 861 IPR021789 -
Rops2g03709 881 ProSiteProfiles KHA domain profile. 799 879 IPR021789 -
Rops2g03709 881 Gene3D - 54 291 - -
Rops2g03709 881 Pfam Ankyrin repeats (3 copies) 521 609 IPR002110 GO:0005515
Rops2g03709 881 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Rops2g03709 881 PANTHER POTASSIUM CHANNEL AKT1 18 863 IPR045319 GO:0005249|GO:0006813
Rops2g03709 881 Pfam Ion transport protein 53 297 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops2g03709 881 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Rops2g03709 881 SMART cnmp_10 370 487 IPR000595 -
Rops2g03709 881 SUPERFAMILY Voltage-gated potassium channels 47 291 - -
Rops2g03709 881 CDD CAP_ED 370 475 IPR000595 -
Rops2g03709 881 Gene3D - 516 700 IPR036770 -
Rops2g03709 881 ProSiteProfiles Ankyrin repeat profile. 646 678 IPR002110 GO:0005515
Rops2g03709 881 Pfam Cyclic nucleotide-binding domain 390 474 IPR000595 -
Rops2g03709 881 SUPERFAMILY Ankyrin repeat 519 699 IPR036770 -
Rops2g03709 881 SUPERFAMILY cAMP-binding domain-like 295 490 IPR018490 -
Rops2g03709 881 FunFam Potassium channel KAT2 358 494 - -
Rops2g03709 881 Gene3D Jelly Rolls 335 495 IPR014710 -
Rops2g03709 881 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03709 Rops-Chr2 68665638 68672512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03709 12 861 Ion Channels AT2G25600 65.304 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03709 K21867 - gmx:100819491 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03709 2 68665638 68672512 Rops2g03709 2 68665638 68672512 ECH