Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03700 ATGGCTACAACCACCACCACCGCCACCACAACACCTTGCAGAGATGAAACCGACTATGACAGCAGCTCCTCCTCCATCACCGTGCCGGAATCAAGCCGGAGCTGGATGAGCAACCTCAGCTTCGGCAGTCGCCGGCGCCGGAGCTCCGTCTCCGTTTGTTCCACCACAACAGACACCTCTTTGTTCCTAGGTTCCCACGCCAAGCCACACAAGGCAAACCAAGCTGCATGGGAGGCCATGCGGCGGCTCCGAAGCGACAAGGGTCGTGTCGGACTCGACCACTTCCGCCTCTTACGGCGGCTCGGAAGTGGTGACATCGGTAATGTCTACCTTTGCCAGATAAGGAACCCTTTGGTGGGTTTACCACAGTGTTTCTATGCCATGAAAGTGGTGGATAGAGAAGCACTTGCTATAAGGAAGAAGTTGCAAAGAGCTGAAATGGAGAAAGAGATTTTGGGTATGCTTGATCACCCTTTTTTGCCTACCTTGTACACTGAGTTTGATGCTTCTCATTACTCTTGCTTGGTCATGGAGTTTTGTCCTGGTGGAGACTTATATGCTGCACGCCAACGCCAACCAGGGAAACGCTTTAGCATATCATCCACTAAGTTTTATGCTGCTGAGACACTCTTGGCATTAGAGTATCTTCACATGATGGGAATAGTGTACAGGGATTTGAAGCCAGAGAATGTGTTGGTAAGAGAAGACGGGCACATTATGCTTTCAGATTTTGATCTTTCTCTCAAATGTGACGTTGTTCCTAAGCTTTTTAGGAATATGGTTATGAGGGTTGCATGGAGTTCGAAGAAGAAGAGAGACAGAAAAAGAGAGAAGGAGGAAGAGGGAAAAGAAAAAGAAATAGAAGAAATGGGGGAGAAGGAATGGTCATCGATCAAGGTGGTTATCGAAGACGCGGTGGCGTTGGACCTATCGATGATGAGTGGCGGTCGAGACTGTACTGAGAGACATGGTGGTGGAGGAGAGGTGACGGAGAAATAA 999 0.4915 MATTTTTATTTPCRDETDYDSSSSSITVPESSRSWMSNLSFGSRRRRSSVSVCSTTTDTSLFLGSHAKPHKANQAAWEAMRRLRSDKGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPLVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSISSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLFRNMVMRVAWSSKKKRDRKREKEEEGKEKEIEEMGEKEWSSIKVVIEDAVALDLSMMSGGRDCTERHGGGGEVTEK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03700 332 Coils Coil 128 148 - -
Rops2g03700 332 PANTHER FLIPPASE KINASE 1-RELATED 25 285 - -
Rops2g03700 332 SUPERFAMILY Protein kinase-like (PK-like) 78 251 IPR011009 -
Rops2g03700 332 Gene3D Phosphorylase Kinase; domain 1 93 179 - -
Rops2g03700 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Rops2g03700 332 MobiDBLite consensus disorder prediction 272 293 - -
Rops2g03700 332 Pfam Protein kinase domain 96 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03700 332 Gene3D Transferase(Phosphotransferase) domain 1 180 248 - -
Rops2g03700 332 MobiDBLite consensus disorder prediction 271 293 - -
Rops2g03700 332 MobiDBLite consensus disorder prediction 1 29 - -
Rops2g03700 332 FunFam protein kinase PINOID 180 248 - -
Rops2g03700 332 FunFam protein kinase PINOID 2 93 179 - -
Rops2g03700 332 SMART serkin_6 95 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03700 332 ProSiteProfiles Protein kinase domain profile. 95 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03700 Rops-Chr2 68451445 68456907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03700 15 281 AGC Kinase Gene Family AT2G26700 64.207 7.16e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops2g03700 Pkinase 1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03700 K08286 - gmx:100775924 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03700 2 68451445 68456907 Rops2g03700 2 68451445 68456907 ECH