Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03694 ATGGAAGAAGATTTGCTGAAACGCAACACCGATTGCGTTTATTTCTTGGCTTCTCCCCTCACTTGCAAGAAGGGAGTTGAATGTGAATATCGACATAATGAGATTGCGAGACTTAACCCGAGGGATTGCTGGTACTGGTTATCCGGGAATTGCCTTAATCCCACGTGTGCTTTCAGACACCCTCCATTGGATACTGGAGTTCCATCAGAACCTACACAATCTTCATTACCCACAAACAAGACAATGGTTCCCTGTTATTTTTTCTTCAATGGATTTTGCAGCAAAGGTGACAGATGCTCATTTTTGCATGGGCCTGATGACAGCTTTTTAGCCATAAAGCCTGTGAAGAATGACAATGGAAGTGCTGATGCACTCAATCAAGATAATAAAACTTCATCAGGAAATAAAACAGGTGTTGCATCAATGGCAAATGAAACACATTTTGACCGATCTTTAACTGCCCCAAAAGCTTATTCTGATTTTAAAATTCAGTCTAAGGAAGATTTTCAGCTACCATTACCTGAAAATGTTAAACAGCAAGGTGATTGCCGGGAGTTATCTTCTTTCAACCATAAAGAAGCTACAGTGACTAAGTCGGACTCTGTGTTTCCAGATCACAACTTCGTTCATAACATATCTCATTTACACACTGAGCAGAGTTCAGAAGAGCTAGTAAATAATCACATAGAGCGTGAGGAGCGGTGGGAATCATCCCCAGGATTTGATGTTCTTGTTCATGATGAATCGGAGAACTTGGGTTATGAGGATGATTCCGAATATTTGCCTGGGCTGGATATGGATGACCAGGAACTGAATGAGCAACACTCGGGGTATGAATTTAAAGATTCAGTTGAGTATGATAATATGTGCCCAGAATCTGATATTCTGCATGAACAGGAAACATATGATGGTTACAGATGTTTCAATGGAGATTTTACTCATGCTAATGGCAGAAAAGTTTGTGCTTATTCCAGAGAGATAATCTTAGAATCCATGTTGTCCAGGAAAAGGATTCCGATGTCTGCCGAGATGGCTGCTTGTGACAGGAACTTAGATCTACGAGATCATCTGAGGAGACGTAGGGAGATTAATGGTCCTTCAGTTACAGATTTCTTCAGAAGACATAAATCATCTTCTTTGATGGTTCGAAACCAGGAAAGGCATCAAAGGCGTGGTGTTGGTCAGCGGCTAAGTAGAAGATTGACATCACAAGTGGGATTTAGCGCCATAGACTCGATGGGAGAGGTTGAAACTCTTTCAATTGCTAACAAGCACAGTTTATTTAGGCATTCCCAGCAACATAGACCAAGAAGGCATTATAGGGAAAAACTAGCTAAGCGGCAGTTGCTTTCATCTAAAATATCCAGAAAACCATTTTTAAAGCAAAGGAGATTTATTCAGGAATCCACTGCATTTTCAGGACCTAAGACTCTTGCGGAAATTAAAGAAGAGAAGAAGAAGAAGGCTGAAGAAAGCTTACATTGTGAAAGCATATCAGCTGATTTCCAGGATCCCAAGCCTCTTAGTGAAATTCTCAAGGACAAAAGGACCATGGATCGAGTGAGAGATGGCAATACCTGCCACAATTGA 1590 0.4094 MEEDLLKRNTDCVYFLASPLTCKKGVECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFRHPPLDTGVPSEPTQSSLPTNKTMVPCYFFFNGFCSKGDRCSFLHGPDDSFLAIKPVKNDNGSADALNQDNKTSSGNKTGVASMANETHFDRSLTAPKAYSDFKIQSKEDFQLPLPENVKQQGDCRELSSFNHKEATVTKSDSVFPDHNFVHNISHLHTEQSSEELVNNHIEREERWESSPGFDVLVHDESENLGYEDDSEYLPGLDMDDQELNEQHSGYEFKDSVEYDNMCPESDILHEQETYDGYRCFNGDFTHANGRKVCAYSREIILESMLSRKRIPMSAEMAACDRNLDLRDHLRRRREINGPSVTDFFRRHKSSSLMVRNQERHQRRGVGQRLSRRLTSQVGFSAIDSMGEVETLSIANKHSLFRHSQQHRPRRHYREKLAKRQLLSSKISRKPFLKQRRFIQESTAFSGPKTLAEIKEEKKKKAEESLHCESISADFQDPKPLSEILKDKRTMDRVRDGNTCHN* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03694 529 FunFam Zinc finger CCCH domain-containing protein 17 1 63 - -
Rops2g03694 529 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 521 - -
Rops2g03694 529 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
Rops2g03694 529 ProSiteProfiles Zinc finger C3H1-type profile. 79 106 IPR000571 GO:0046872
Rops2g03694 529 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Rops2g03694 529 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Rops2g03694 529 SMART c3hfinal6 79 105 IPR000571 GO:0046872
Rops2g03694 529 Gene3D - 2 64 - -
Rops2g03694 529 Gene3D - 70 197 - -
Rops2g03694 529 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Rops2g03694 529 SUPERFAMILY CCCH zinc finger 79 104 IPR036855 GO:0046872
Rops2g03694 529 Pfam Zinc-finger containing family 7 63 IPR041686 -
Rops2g03694 529 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 82 105 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03694 Rops-Chr2 68328280 68331627 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Rops2g03694 zf-CCCH_3 2.3e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03694 - - aprc:113847503 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03694 2 68328280 68331627 Rops2g03694 2 68328280 68331627 ECH