Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03676 ATGGATGCTATTGGTGCAACTATCACCTTCCTGCTGTTGATCATGTCCTTATCCTCAGTAGGTGCAAGGGCTAAAACACAACAACTAAATCAGATAGCACCTGGTTCCTCACTTTCCCCCAATAGTACTCATCCGTGGCTTTCCCCATCTGGTCTCTTTGCATTTGGCTTTTATCGGCAAGGCAGTGGCTTCGTGGTTGGAATTCAGTTGGTTGGCGAGAAGAGCACAACAGTGGTATGGACTGCAAACCGGGATGATCCTCCGGTTACCTCAAATGCTAAGCTAGAACTCACCGTGGATGGTAAGCTAATAATACTAACAGAACAAGGACAACAGAAGAAGCTAATTGCTAATGCTGGTGCAACAGCTTCCTCTGCCTCCATGCTTGATTCCGGGAACTTTGTACTATACGACAATAATTCCAGCATCATATGGCAGAGCTTCGATCACCCAACTGATACTATTTTAGTGGGTCAATCTCTACCTCCCGGAGGCCAATTGTTCTCTAGTTTATCAGAGAACAAATGCTCAACAGGACGGTTTCGTCTCAAGATGCAGGAGGATGGAAATCTTGTTCTGTATCCAGTAGACACAACTGACACAGGGTGGGATGCTTACTGGGCAGCTAATGCTGGAGTCTTTAGTGGTCAAAAGCATTATCTTTACTTCGACAAAACAGGTTCACTGCAGATCAGGAATAGCAGTAATTTGACTGTTCAGAGTCTTTTTGATGATATGTCTTTGGGTAACGACGACCTCAACAATGGGAAATGGACCATTTATCGTGCAACCCTCAATTTTGACGGGGTTTTTCAGCTGTATGCTCATGTTAACAGTGACAGTCACAAAAAAATCAAAAAATGGCCGGATGGCAGCGCATGTGATTCAATAAAGGGTTTTTGTGGTTTCAACAGCTACTGCGCATTCTATGACGATCAACCAGTGTGCAATTGTCTCAAGGGTTTTGACTTTGTAGATGCAAGTCAAAATACTCTTGGCTGCAAAAGGAACTTTTCAGAAGCAGAGTGCAAAGATGAGAAAGACAATGGAGCCTTTTATAACATGGCCTGGATGAACAGTATTTTATGGGAGGATCATCCCTATTTCGAGGCTGAAATGTCAGGGGAAGACGAATGCTCCTCTTCTTGTTTGTCTGATTGCTACTGTTGGGCTGCACTGTATGATGGACAAAACTGCCAGAAATATGGGCTGCCTTTGAGATATGTTAAAAGGAAGTTAAGTGGAGCTGACTCCACCACGGTATTCTTAAAGGTGGGAAACAACAGCCTCAAACAATGGAAGTCCAATGGTAAACCTGATCCTCCACAACCACCTCCAATGAAGAGTACAAGTAACAAAGCAATTGTGCATATTGTTGTTGTTACTTCAGTATTTACTCTACTTTTATGTTTAACGATTGCGATTTCCAGCCATTACATGTACAAGATTCGAGTGTTACAGTACAAAAGGGTGACGGAGACCGGGAACTTGGGGCTGAATGAAGAGGTGGCTTTGAGAAGGTTTACATACAATGAGCTGAAAAGAGCTACAAATCATTTCAGACAAGAGCTAGGTAAAGGTTCTTTTGGAGCAGTTTACAAAGGGGCTTTATACAAAGGTAGAAGACTGATAGCTGTGAAGAGACTAGAGAAGTTAGTGGAAGAAGGAGAAAGGGAGTTTCAAGCAGAAGTGCGAGCCATTGGAAAAACCCACCACAGGAACCTAGTTCGATTACTAGGTTTTTGTGCCGAGGGTTCTAAAAGGCTTTTGGTTTATGAATACATGAGCAATGGTTCCCTTGGAAACCTTCTCTTTGGGAATCAAAGACGACCAGATTGGGATGAGAGAGTAAGAATAGCACTGGACATTGCAAGAGGGATGCTCTATCTCCATGAAGAGTGTGAGGCACCAATCATTCATTGTGACATAAAGCCTCAAAACATCTTGATGGATGAGCTTTGGACTGCCAAGATATCTGATTTCGGCCTTGCAAAACTTCTAATGCCAGATCAAACCAGAACATTCACAGGGGTTAGAGGGACAAGAGGGTACTTGGCCCCAGAATGGAACAAGAACACCCCAATATCAGTGAAGGCAGATGTTTATAGCTATGGAATAATGCTATTGGAAATTTTATGTTGCAGAAGAAACATTGCAACTAATGTCTCGAAACCTGAAGAGGTTCTTCTCTCCGGTTGGACCTATAAGTGCTTTGTTGCCGGAGAGTTAAATAAGCTTGTTGTTTGGGAAACAGTTGATAACAATGTCCTGGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGAACCTGTTCTCCGGCCAACAATGAAAAGTGTGGTGTTGATGTTAGAAGGGATTACCGAGGTAGCAATTCCACCTTGTCCAAATTCTAATTCTATGTGA 2409 0.4292 MDAIGATITFLLLIMSLSSVGARAKTQQLNQIAPGSSLSPNSTHPWLSPSGLFAFGFYRQGSGFVVGIQLVGEKSTTVVWTANRDDPPVTSNAKLELTVDGKLIILTEQGQQKKLIANAGATASSASMLDSGNFVLYDNNSSIIWQSFDHPTDTILVGQSLPPGGQLFSSLSENKCSTGRFRLKMQEDGNLVLYPVDTTDTGWDAYWAANAGVFSGQKHYLYFDKTGSLQIRNSSNLTVQSLFDDMSLGNDDLNNGKWTIYRATLNFDGVFQLYAHVNSDSHKKIKKWPDGSACDSIKGFCGFNSYCAFYDDQPVCNCLKGFDFVDASQNTLGCKRNFSEAECKDEKDNGAFYNMAWMNSILWEDHPYFEAEMSGEDECSSSCLSDCYCWAALYDGQNCQKYGLPLRYVKRKLSGADSTTVFLKVGNNSLKQWKSNGKPDPPQPPPMKSTSNKAIVHIVVVTSVFTLLLCLTIAISSHYMYKIRVLQYKRVTETGNLGLNEEVALRRFTYNELKRATNHFRQELGKGSFGAVYKGALYKGRRLIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGNLLFGNQRRPDWDERVRIALDIARGMLYLHEECEAPIIHCDIKPQNILMDELWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPISVKADVYSYGIMLLEILCCRRNIATNVSKPEEVLLSGWTYKCFVAGELNKLVVWETVDNNVLENMVKVALWCIQDEPVLRPTMKSVVLMLEGITEVAIPPCPNSNSM* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03676 802 Pfam D-mannose binding lectin 77 160 IPR001480 -
Rops2g03676 802 ProSitePatterns Protein kinases ATP-binding region signature. 524 547 IPR017441 GO:0005524
Rops2g03676 802 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 798 - -
Rops2g03676 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 165 IPR036426 -
Rops2g03676 802 SMART blect_4 37 151 IPR001480 -
Rops2g03676 802 Gene3D - 152 293 - -
Rops2g03676 802 CDD B_lectin 37 151 IPR001480 -
Rops2g03676 802 PIRSF SRK 2 802 IPR024171 GO:0004674
Rops2g03676 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 174 239 IPR036426 -
Rops2g03676 802 FunFam Serine/threonine-protein kinase 151 285 - -
Rops2g03676 802 SMART serkin_6 518 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03676 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 793 - -
Rops2g03676 802 Gene3D Transferase(Phosphotransferase) domain 1 595 793 - -
Rops2g03676 802 Gene3D Phosphorylase Kinase; domain 1 483 594 - -
Rops2g03676 802 Pfam Protein kinase domain 520 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03676 802 SUPERFAMILY Protein kinase-like (PK-like) 503 786 IPR011009 -
Rops2g03676 802 Coils Coil 546 566 - -
Rops2g03676 802 ProSiteProfiles Protein kinase domain profile. 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03676 802 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Rops2g03676 802 Gene3D - 25 150 IPR036426 -
Rops2g03676 802 CDD STKc_IRAK 524 788 - -
Rops2g03676 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Rops2g03676 802 FunFam S-receptor-like serine/threonine-protein kinase 488 594 - -
Rops2g03676 802 FunFam Serine/threonine-protein kinase 152 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03676 Rops-Chr2 68134655 68137233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03676 505 787 Receptor kinase-like Gene Family AT1G60800 44.178 3.60e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops2g03676 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03676 - - gmx:100815958 1009.21