Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03675 ATGGCTTCCAGTTCCACCCCTGTTGTGCTCTTACTGTTCTTCATGCTATTTACAAAAGAAGCCAATGCTGAAAAGAATCACTCTAGCATCATTGAGTTGGGGTCTTGGCTCTCTCCTAGAGGCAATCAAACTTCATGGGCATCAAGTTCTGGCCATTTTGCTTTTGGCTTTTACCCACAAGATAATGGCTTTGCTGTTGGAATATGGCTGGTTAGGTCACCTGAAAACACAACCACCATTGTCTGGACTGCTAACCGTGATAGTCCACCAGTCTCCTCTAATTCCACATTGCATTTGACCAAGCAAGGCCTGCGTCTTACAAAGGGAGGAGAAGACCAATATCTCAATTCAGACTCAAGAAATTCATATTCAGATTCAGAGCCAGTAGCTTCGGCATCTATGCATGATTCTGGCAACTTTGTGCTCTATGATAAGAATTTTAATGCTACCTGGAAAACCTTTGATTACCCAACTGACACCATATTGGGAGGTCAGAATTTAACTTTCAAGATTGTCTCCAGTATGTCCAAATCAAACCATTCAAGTGGACGTTTCTTTCTCAGCATGCAAGCTGATGGAAACCTTGTCGCTTACCCTTCGAAAAGCCCAGCAGCTATGGAGGATGCTTACTGGGCTTCAAACACTGCTGCTCCGGATTACCGACAGCTCAGTCTTAACGTTGAAGGCTTTCTTTGCCTAAATGGTAATGACATTCAATGTTTTAATGATGGCAATAAGCCAAGAAAGAAGTCAGAGAACACAACTTCAATCTACCGTGCAACACTTGATGTAGATGGGATCTTCAGATTGTATGAGCATAAATTTGAGGGCAGTACTAGCTCACGGGTGGAAATGTTGTGGCAAGCACTGCATGATATATGTCAAATCAAGGGGTTTTGTGGTTTGAACAGTTATTGCTCGAACAAGAGCGGTAATGCTGTGTGTGAGTGTTATCCTGGTTTCTTCCCCTCCAAAAGCAATCCTAACGTGCCTCTGAATTGCATACAGACCCATAGCAAATATGATTGTGAAAGCATTGAAGACCCAATGATGTTGTATAATATTACTCACTTGGAGAATGTGTCTTGGGGTGATGTTCCATATTCGGTTATTCAGACGGAGAAGGAAACTTGTGACAAGTCTTGTTGGGAAGATTGTGATTGTGGGGGAGCATTATATTCGAGCGGCAACTGCAATAAATATAGGCTTCCACTTATATATGGCAGAAGGGTTCCAGATCCAGATACATTAACCGTGGCCCTCTTAAAGATACCTTCAGGAAATGTCATTACTCAAACTCCAACTCCAATTCCAAATTCAAACAACACCGCCATGCTTAAGGTCGTTGTTGATAACAAGAGAAGTCTGATAATGATTCTAACCCTTACTTTGGGTTGCATTTCATTGTTATGTTTGGTCTTTGCAGTGTTCATTTTCTTCACTTACAGGCGTCAAGTCTATGAGTATACAACACTGTCTGCAAGTGAAAATCTGGGATTTACTGAAGAATGTTCCTTGCGTTCATTTTCTTTTGACGAACTTGTTAAATCAACTGGAGGCTTCACGGAAGAGATAGGGAGAGGATCCTTTGGAGCTGTTTATAGTGGTACAATAGGTGACAGTAACAAAAGGATTGCTGTCAAGAGACTGGAGAGAACTGTTGATGAAGGGGAGAGGGAATTCCGAGCTGAAATTACTGCCATTGCTCGAACACATCATAGGAATCTGGTTAAGCTTATTGGTTTTTGTATAGAAGGATCTAAGAAGCTTCTTGTCTATGAATATGTCACTAACGGCTCTCTTGCAAAGCTTCTCTTTAATTGGGAGATGCGCCTGTCTTGGAAAGAGAGAATGAAAATCGCATTGGATGTGGCTAGGGGAGTCCTGTATCTACATGAAGAGTGTGAAGTCCGTATTATTCATTGCAATATAAAGCCTCGAAATATACTTATGGATGAAGCATGGACTGCAAAGATCTCTGATTTTGGATTCGCAAGGCTATTAATGCCTGAACATTCAAGAATGAAAACAGGGGATGATGGGACAAGTGGGTACTTGGCACCTGAATGGCATAAGGATGCATCGGTATCTGTAAAAGCTGATATTTACAGTTTTGGCATGGTATTATTGGAGATTGTCTGCCGCAGAAGCAGTATAGAGTTAAATGTTTCCTCAGCTGAGGAGATACTTCTTTCCAGCTGGGTGTATCAATGCTTTGCAGCAGGACAGTTGAAAAAGCTTGTTACACATGAAGAAGATGTAGATTGGAGGATATTGGAAAGAATGGTGAAGGTGGGATTGTGGTGTGTGCAAGAGGATCCATTTCTTCGTCCTTCAATGAAGAATGTCATCTTGATGTTAGAAGGATTGAAAGATATTCATATTCCTCCCTCTCCAGCCAGCTAG 2406 0.4173 MASSSTPVVLLLFFMLFTKEANAEKNHSSIIELGSWLSPRGNQTSWASSSGHFAFGFYPQDNGFAVGIWLVRSPENTTTIVWTANRDSPPVSSNSTLHLTKQGLRLTKGGEDQYLNSDSRNSYSDSEPVASASMHDSGNFVLYDKNFNATWKTFDYPTDTILGGQNLTFKIVSSMSKSNHSSGRFFLSMQADGNLVAYPSKSPAAMEDAYWASNTAAPDYRQLSLNVEGFLCLNGNDIQCFNDGNKPRKKSENTTSIYRATLDVDGIFRLYEHKFEGSTSSRVEMLWQALHDICQIKGFCGLNSYCSNKSGNAVCECYPGFFPSKSNPNVPLNCIQTHSKYDCESIEDPMMLYNITHLENVSWGDVPYSVIQTEKETCDKSCWEDCDCGGALYSSGNCNKYRLPLIYGRRVPDPDTLTVALLKIPSGNVITQTPTPIPNSNNTAMLKVVVDNKRSLIMILTLTLGCISLLCLVFAVFIFFTYRRQVYEYTTLSASENLGFTEECSLRSFSFDELVKSTGGFTEEIGRGSFGAVYSGTIGDSNKRIAVKRLERTVDEGEREFRAEITAIARTHHRNLVKLIGFCIEGSKKLLVYEYVTNGSLAKLLFNWEMRLSWKERMKIALDVARGVLYLHEECEVRIIHCNIKPRNILMDEAWTAKISDFGFARLLMPEHSRMKTGDDGTSGYLAPEWHKDASVSVKADIYSFGMVLLEIVCRRSSIELNVSSAEEILLSSWVYQCFAAGQLKKLVTHEEDVDWRILERMVKVGLWCVQEDPFLRPSMKNVILMLEGLKDIHIPPSPAS* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03675 801 CDD STKc_IRAK 525 790 - -
Rops2g03675 801 Gene3D Transferase(Phosphotransferase) domain 1 596 795 - -
Rops2g03675 801 Gene3D - 26 155 IPR036426 -
Rops2g03675 801 Gene3D Phosphorylase Kinase; domain 1 484 595 - -
Rops2g03675 801 SUPERFAMILY Protein kinase-like (PK-like) 502 788 IPR011009 -
Rops2g03675 801 Pfam Protein kinase domain 522 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03675 801 MobiDBLite consensus disorder prediction 112 130 - -
Rops2g03675 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 167 271 IPR036426 -
Rops2g03675 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 798 - -
Rops2g03675 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 596 795 - -
Rops2g03675 801 ProSiteProfiles Bulb-type lectin domain profile. 28 155 IPR001480 -
Rops2g03675 801 Pfam D-mannose binding lectin 79 177 IPR001480 -
Rops2g03675 801 FunFam S-receptor-like serine/threonine-protein kinase 489 595 - -
Rops2g03675 801 MobiDBLite consensus disorder prediction 110 130 - -
Rops2g03675 801 ProSiteProfiles Protein kinase domain profile. 519 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03675 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Rops2g03675 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 215 IPR036426 -
Rops2g03675 801 CDD EGF 294 326 - -
Rops2g03675 801 FunFam Serine/threonine-protein kinase 157 283 - -
Rops2g03675 801 Gene3D - 170 296 - -
Rops2g03675 801 FunFam Serine/threonine-protein kinase 158 297 - -
Rops2g03675 801 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Rops2g03675 801 Pfam S-locus glycoprotein domain 252 324 IPR000858 GO:0048544
Rops2g03675 801 SMART blect_4 37 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03675 Rops-Chr2 68130498 68133083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03675 429 799 Receptor kinase-like Gene Family AT4G18250 36.815 8.90e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops2g03675 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03675 - - cam:101496142 1113.6