Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03673 ATGATTAATAGTTTGTACGAGATAACCCTTTTAGTTCGCCGACAGGGTGCCTTCATTGGATCAGAGTTACTTGCCCCCCCTCTCTCCTTTTTTCCCCCTCTATATCTTGCTATTCTTCTGTTCCCTTCTGTACTTGGCCAACACTCTTTGCACAATATATTATATTATCCCTCAACTCCCAACAACCATAACACCATCATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGGCAGCGTCATTGGGGTTCTTGGGTATCAGAAATTCGACACCCACTTCTGAAAAGAAGGGTGTGGCTAGGAACATTTGAGACAGCAGAAGAAGCAGCTAGAGCCTATGATCAAGCTGCCATTTTGATGAGTGGTAGAAATGCCAAAACCAATTTCCCAATAACCCAAACTCCTGAAGGTGACCCAAAGAGCATTACCAGTGAGGAAAGCCCATCCACCTCAAAGGATCTGGAAGAAATCCTACATGCTAAGCTTCGAAAATGTGGCAAGGTACCCTCACCTTCCATGACATGCTTGAGGCTTGACACAGAGAATTCTCACATTGGAGTGTGGCAAAAGCGTGCAGGGCGTGCTTCTGATTCAAACTGGGTCATGACGGTTCAGCTTGGAAACAAAAGTGCCAACAAGGATAATAACCCTCCTTTACCTTCATCTGATAATCAGTCCCCATCTGCATTGACAGCAACTCAGGAACTTGTGAGAACAGAGATTGATGAGGAGGAGAGAATTGCCCTTCAAATGATAGAGGAACTTCTCAACAACAGGAACTGCCCTGGCTCATCATCGTTCAACAATATTCAAGGGGATGATCATGACAACTTTTTTCTTTAA 840 0.444 MINSLYEITLLVRRQGAFIGSELLAPPLSFFPPLYLAILLFPSVLGQHSLHNILYYPSTPNNHNTIMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSITSEESPSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGRASDSNWVMTVQLGNKSANKDNNPPLPSSDNQSPSALTATQELVRTEIDEEERIALQMIEELLNNRNCPGSSSFNNIQGDDHDNFFL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03673 279 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Rops2g03673 279 CDD AP2 71 131 IPR001471 GO:0003700|GO:0006355
Rops2g03673 279 MobiDBLite consensus disorder prediction 127 150 - -
Rops2g03673 279 MobiDBLite consensus disorder prediction 207 229 - -
Rops2g03673 279 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Rops2g03673 279 Gene3D AP2/ERF domain 71 131 IPR036955 GO:0003700|GO:0006355
Rops2g03673 279 Pfam AP2 domain 72 120 IPR001471 GO:0003700|GO:0006355
Rops2g03673 279 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Rops2g03673 279 MobiDBLite consensus disorder prediction 127 147 - -
Rops2g03673 279 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Rops2g03673 279 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 68 219 - -
Rops2g03673 279 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Rops2g03673 279 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03673 Rops-Chr2 68090995 68092232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03673 67 256 AP2-EREBP Transcription Factor Family AT1G15360 62.000 1.18e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops2g03673 AP2 1.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03673 - - gmx:100787517 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03673 2 68090995 68092232 Rops10g01409 10 27118093 27119194 ECH
Rops2g03673 2 68090995 68092232 Rops2g03673 2 68090995 68092232 ECH