Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03648 ATGAGACTTTGGAGCAGCAGCAGCAACAACAAAGAGATGGAGAAAAAGTGTGGATGCTGGGCTGTTCTTAAACGCGGTGTTAGAGGTGCGTGCAAACCTTCAGCTTCCAGAGACTCTCCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACAAGATACCTGAATGCTAGCAATAGAGAACTATGTCCTCCCAATGAAGCCCGATTATCATCTTCTGATAATCCTGAACTCCCACCTCAGGAAAATAAGGCTCCTTGCCAGCTTCTTCAATTTACATTTCAAGAACTAAAAGCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGCTTTGGTTATGTATTCAAAGGATGGATTGAGGAAGATGGAACTGCGCCAGCAAAACCTGGGTCAGGGATTACAGTGGCTGTCAAAAGTTTGAAGCCGGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTCCTTGGACAGCTTCATCATCCTAACCTTGTGAAACTTATTGGCTACTGTATTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCTCTTCCGTGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCAGAACCAGTCATTTACAGAGATTTTAAAACATCAAACATTTTGCTTGATACAGAGTATAATGCGAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTCTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTGACAGCTAAAAGTGACGTTTATAGCTTTGGAGTTGTGTTACTTGAGATTTTAACAGGAAGAAGATCAATGGACAAGAAGCGACCAAGTGGTGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTGGCTGACAAACGAAAACTGTACCAACTTGTTGATCCTCGCTTGGAACTAAATTATTCTTTAAAAGCAGTGCAGAAAATTTCTCAGTTATCTTACAATTGCCTCAGTAGAGACCCCAAATGCCGTCCTAACATGGATGAAGTTGTGAAGGTTCTAACTCCATTGCAGGATCTTAATGACCTTGCAATCTTGTCTTATCACTCTCGTTTATCTCAACAAGGGAGAAGAAAGAAGAAATCAGATGGAACTCCACAAATCACATACACACAGTCCAAGAGTATCAGGGCTTCTCCCTTGAATACTACTGGCAAACAGCATCGATGA 1329 0.4259 MRLWSSSSNNKEMEKKCGCWAVLKRGVRGACKPSASRDSPNTIPRTSLVYDAATETRYLNASNRELCPPNEARLSSSDNPELPPQENKAPCQLLQFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVLGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKAVQKISQLSYNCLSRDPKCRPNMDEVVKVLTPLQDLNDLAILSYHSRLSQQGRRKKKSDGTPQITYTQSKSIRASPLNTTGKQHR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03648 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Rops2g03648 442 CDD STKc_IRAK 114 390 - -
Rops2g03648 442 Gene3D Phosphorylase Kinase; domain 1 84 193 - -
Rops2g03648 442 ProSitePatterns Protein kinases ATP-binding region signature. 114 146 IPR017441 GO:0005524
Rops2g03648 442 FunFam Probable serine/threonine-protein kinase PBL8 194 407 - -
Rops2g03648 442 MobiDBLite consensus disorder prediction 418 442 - -
Rops2g03648 442 SUPERFAMILY Protein kinase-like (PK-like) 90 395 IPR011009 -
Rops2g03648 442 MobiDBLite consensus disorder prediction 407 442 - -
Rops2g03648 442 FunFam Serine/threonine-protein kinase BIK1 75 193 - -
Rops2g03648 442 Pfam Protein tyrosine and serine/threonine kinase 112 387 IPR001245 GO:0004672|GO:0006468
Rops2g03648 442 ProSiteProfiles Protein kinase domain profile. 108 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03648 442 PANTHER OS01G0588500 PROTEIN-RELATED 69 391 - -
Rops2g03648 442 Gene3D Transferase(Phosphotransferase) domain 1 194 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03648 Rops-Chr2 67501433 67505574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03648 96 387 Glycoside Hydrolase AT3G07070 55.405 2.13e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops2g03648 PK_Tyr_Ser-Thr 5.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03648 - - aprc:113848012 832.787