Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03618 ATGGCTGTCACTGCTTTGTTCTTGGTGCTATTACTACACTTGTCAACAATTTTTGGTTCTGCAGTTGTCTTGCAATCAAAGGATTGTGGCACTAATTGGGTAGCTCACTCATATTCCAGTCATGGTCAGGAGCTATTCTACATAAATGGGAACATAGTAACCAAAGTTGCTTTCTGTAAGGCTCTCCAATGGTACATTGCAACCGGTTGTGATGTGAAGGACTACTTTGGAAGTAACAACTGTGCATTGGATGTCTCTTTTGTGAATTTACCTTCAAAGGCAGGAAGGAAACTTCTGCAGAAGGATTTAAGCAATAATTCCACGTCACAAGGAGTTTCTAAGTCTCTGTCAACCAACAAAGTTGGTATTTTTGCGGGTGGAGCTTTGTTGGTGTGTTGTGCTGTTCTTTGTCCTTGTTTCTATGCAAAGAGAAGGACAGCAACTGCTCATACTGTTCTGGTCAAGGACCCAAATTCAATGGATTCGGCTACCTCCTTTGAAGCCTCCGTTACTGATAAGATCCCAGCCAGTCCACTTCGGGTGCCACCTAGTCCATCAAGATTCTCAATGTCTCCAAAACTCAACAGACTTCAAACATTACATCTCAACCTGAGTCAGGTTACAAGAGCTACCCGTAATTTCTCAGAAACATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTAACTTAGAAGATGGGCTGGTCGTGGCTGTAAAACGTGCAAAGAGGGAACATTTTGAGAGCTTGAGAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAGCTACTAGGTTATATTGACAAAGGAAATGAACGTCTTCTTATTACAGAGTATGTGCCAAATGGCACTCTTCGAGAACATTTGGATGGTCTGCGTGGAAAAATCCTGGACTTCAATCAGCGTCTTGAAATTGCAATTGATGTTGCTCATGGATTGACCTATCTGCATCTTTATGCAGAAAAGCCAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAGTATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGCTTGGTCCAGTGAACACTGAGCAAACACACATATCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCCGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGATGTTTACTCATATGGAATTTTGCTTTTAGAAATTGTGACAGGCCGTCGTCCTGTTGAGTTGAAAAAAACTGTCCAAGAGCGGGTTACACTAAGATGGGCCTTCAGGAAGTATAATGAAGGAAGTGTGGTGGAACTGGTGGATCCTTTAATGGAAGAAGCTGTAAATGCAGATGTTCTTATGAAGATGTTTGATTTGGCATTTCAATGTGCAGCACCTGTTCGAGCTGATCGACCTCACATGAAATCAGTGGGTGAGCAATTGTGGGCGATAAGGGCAGATTACCTCAAGAGTTCAAGGAGATGA 1500 0.4207 MAVTALFLVLLLHLSTIFGSAVVLQSKDCGTNWVAHSYSSHGQELFYINGNIVTKVAFCKALQWYIATGCDVKDYFGSNNCALDVSFVNLPSKAGRKLLQKDLSNNSTSQGVSKSLSTNKVGIFAGGALLVCCAVLCPCFYAKRRTATAHTVLVKDPNSMDSATSFEASVTDKIPASPLRVPPSPSRFSMSPKLNRLQTLHLNLSQVTRATRNFSETLQIGEGGFGTVYKANLEDGLVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERLLITEYVPNGTLREHLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPVNTEQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSYGILLLEIVTGRRPVELKKTVQERVTLRWAFRKYNEGSVVELVDPLMEEAVNADVLMKMFDLAFQCAAPVRADRPHMKSVGEQLWAIRADYLKSSRR* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03618 499 Pfam Protein tyrosine and serine/threonine kinase 219 486 IPR001245 GO:0004672|GO:0006468
Rops2g03618 499 ProSiteProfiles Protein kinase domain profile. 214 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03618 499 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 488 - -
Rops2g03618 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Rops2g03618 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 291 499 - -
Rops2g03618 499 CDD STKc_IRAK 220 486 - -
Rops2g03618 499 Gene3D Transferase(Phosphotransferase) domain 1 291 498 - -
Rops2g03618 499 Gene3D Phosphorylase Kinase; domain 1 185 290 - -
Rops2g03618 499 SMART serkin_6 214 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03618 499 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
Rops2g03618 499 SUPERFAMILY Protein kinase-like (PK-like) 196 489 IPR011009 -
Rops2g03618 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 186 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03618 Rops-Chr2 66940891 66945877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03618 204 490 Receptor kinase-like Gene Family AT5G59700 46.875 3.46e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Rops2g03618 PK_Tyr_Ser-Thr 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03618 - - aprc:113845864 868.996