Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03617 ATGTCCACGAACCACTTATCTAATGGTGACTCTGAGTTCCTCATTCGCCAACCTTTGCTGTCTTCTCATAGATCCATTGTCAACTCAACGTCCCAGGTTGCCATCGTTGGTGCTGATGTCTGCCCTATTGAAAGCCTTGACTATGAAATTTTTGAGAATGAGTTCTTCAAGCAGGATTGGAGGAGCAGAGGGGCTGTTCAGATATTGCAGTACATATGTATGAAGTGGCTCTTGTGTTTGTTGATTGGTATGATTGTTGGCCTTGTTGGGTTTTGCAACAATCTCGCTGTTGAGAATCTTGCTGGTGTGAAGTTTGTGATCACATCCAATATGATGTTGGAAAGGAGGTTTCTGCTGGCCTTTGTAATATTTTTTGCTTCAAATTTGAGTCTCACGCTTTTTGCCTCTACAATCACGGCTTTGATAGCACCTACTGCTGCCGGTTCAGGTATACCTGAGGTGAAGGCTTACCTAAATGGCGTAGATGCACCTGGAATATTTACTGTACGAACTCTGTTTGTTAAGATCATTGGAAGCATTACGGCAGTGGCATCATCTCTTCTTATTGGGAAGGCAGGGCCTATGGTGCATACAGGTGCATGTGTGGCAGCATTGTTGGGTCAGGGTGGGTCAAAGAGATTTGGGTTAACGTGGAAATGGTTACGGTTTTTTAAGAATGACCGAGATCGACGAGATCTAATAATCTGTGGATCAGCAGCTGGGATTGCTGCTGCTTTCCGTGCTCCTGTTGGTGGGGTTTTGTTTGCTTTTGAAGAGATGGCATCTTGGTGGAGGACTGCCCTTCTGTGGAGAGCTTTCTTCACAACAGCAATAGTTGCAATTTTCCTTCGTGCTATGATGGATGTATGTTTGAGTGGTAAATGTGGGTTATTTGGTAAAGGGGGACTGATAATGTTTGATGCTTATACAGCAAGTGTTTCATATCATTTGGCAGATGTTCCTCCTGTGTTTATTCTCAGTGTTATAGGGGGGATACTTGGAAGCTTATATAATTATATGTTGAACAAAGTTCTTCGAGTATACAATGTTATCAATGAGAAAGGCACCATTTGCAAAATTTTGCTTGCTTGTTTAATCTCCATTTTTACATCTGGCCTTCTTTTTGGAATGCCATGGTTTGCATCTTGCCGACCCTGTCCTCCTGATGCAGTTGAGCCTTGTCCTACAATAGGTCGGTCTGGTATCTACAAGAAATTCCAATGCCCTCCTAATCACTACAACGATCTTGCCAGCCTCATATTTAACACAAATGATGATGCTATCAAAAATCTATTTGGCAAGAACACTGAGAGTGATTTTGAGCTTTCATCAATGTTAATCTTTTTCATCACATGCTTTTTGTTAAGCATCTTTAGCTGTGGAGTTGTTGCTCCAGCTGGTCTTTTTGTGCCGATTATTGTGACTGGTGCATCTTATGGACGCTTTGTTGGAATGTTAGTTAGCAAATGGTCCAATCTTAACCATGGCCTTTATGCGGTACTTGGCGCTGCTTCTTTTCTTGGTGGATCTATGAGGACGACTGTTTCTCTGTGTGTAATTATGCTAGAACTGACCAATAACCTGTTATTGCTGCCCCTAATGATGATGGTGCTTTTGGTATCCAAGACTGTAGGAGATGTTTTCAATGCAAACATATATGACCTTATAATGAAAGCCAAGGGTTTCCCTTATTTAGAAACTCATGCTGAACCATATATGAGGCAGCTAACAGTAGGTGATGTAGTCACAGGCCCACTTCAGATGTTTAATGGCATTGAGAAGGTTCGTAACATAGTGTTTGTCCTCAAAACTACAAGACATAATGGTTTTCCTGTTATTGACGAGCCTCCATTTTCTGAAGCTCCAGTTTTATTTGGTATAATCCTTCGTAACCATCTTCTCACATTGTTAAAGAAGAAAGCTTTCTTGTCTTCACCTATGGCAATGAGTCATGATATCTTGAAACAGTTCTCATCAGATGATTTTGCAAAGAAGGGTTCAAACAAAGGTGATAGGATTGAGGATATACAGTTAACAGAGGAAGAGATGAACATGTTTGTCGATCTACATCCTTTTACTAATACTTCACCTTATACTGTTGTGGAAACAATGTCACTGGGGAAGGCCCTTATACTTTTTCGAGAGGTTGGTTTAAGGCACTTGCTTGTGATCCCCAAGATCTCTGGTAGATCACCTGTAGTGGGTATACTGACAAGGCACGATTTCACACCAGAACATATATTGGGAGGCTTATCGTATTCATGA 2265 0.4141 MSTNHLSNGDSEFLIRQPLLSSHRSIVNSTSQVAIVGADVCPIESLDYEIFENEFFKQDWRSRGAVQILQYICMKWLLCLLIGMIVGLVGFCNNLAVENLAGVKFVITSNMMLERRFLLAFVIFFASNLSLTLFASTITALIAPTAAGSGIPEVKAYLNGVDAPGIFTVRTLFVKIIGSITAVASSLLIGKAGPMVHTGACVAALLGQGGSKRFGLTWKWLRFFKNDRDRRDLIICGSAAGIAAAFRAPVGGVLFAFEEMASWWRTALLWRAFFTTAIVAIFLRAMMDVCLSGKCGLFGKGGLIMFDAYTASVSYHLADVPPVFILSVIGGILGSLYNYMLNKVLRVYNVINEKGTICKILLACLISIFTSGLLFGMPWFASCRPCPPDAVEPCPTIGRSGIYKKFQCPPNHYNDLASLIFNTNDDAIKNLFGKNTESDFELSSMLIFFITCFLLSIFSCGVVAPAGLFVPIIVTGASYGRFVGMLVSKWSNLNHGLYAVLGAASFLGGSMRTTVSLCVIMLELTNNLLLLPLMMMVLLVSKTVGDVFNANIYDLIMKAKGFPYLETHAEPYMRQLTVGDVVTGPLQMFNGIEKVRNIVFVLKTTRHNGFPVIDEPPFSEAPVLFGIILRNHLLTLLKKKAFLSSPMAMSHDILKQFSSDDFAKKGSNKGDRIEDIQLTEEEMNMFVDLHPFTNTSPYTVVETMSLGKALILFREVGLRHLLVIPKISGRSPVVGILTRHDFTPEHILGGLSYS* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03617 754 Pfam CBS domain 694 742 IPR000644 -
Rops2g03617 754 Gene3D - 566 744 IPR046342 -
Rops2g03617 754 PRINTS Chloride channel signature 496 512 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PRINTS Chloride channel signature 144 161 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PRINTS Chloride channel signature 514 533 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PRINTS Chloride channel signature 239 258 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PRINTS Chloride channel signature 464 484 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PRINTS Chloride channel signature 175 194 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PRINTS Chloride channel signature 552 566 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 ProSiteProfiles CBS domain profile. 693 754 IPR000644 -
Rops2g03617 754 Gene3D Clc chloride channel 66 565 - -
Rops2g03617 754 PRINTS Plant CLC chloride channel signature 260 268 IPR002251 GO:0005247|GO:0006821|GO:0016020
Rops2g03617 754 PRINTS Plant CLC chloride channel signature 49 57 IPR002251 GO:0005247|GO:0006821|GO:0016020
Rops2g03617 754 PRINTS Plant CLC chloride channel signature 292 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Rops2g03617 754 PRINTS Plant CLC chloride channel signature 274 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Rops2g03617 754 PRINTS Plant CLC chloride channel signature 416 432 IPR002251 GO:0005247|GO:0006821|GO:0016020
Rops2g03617 754 Pfam Voltage gated chloride channel 132 545 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops2g03617 754 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 23 748 - -
Rops2g03617 754 SUPERFAMILY CBS-domain pair 568 742 IPR046342 -
Rops2g03617 754 SUPERFAMILY Clc chloride channel 53 567 IPR014743 -
Rops2g03617 754 CDD CBS_pair_voltage-gated_CLC_euk_bac 568 745 - -
Rops2g03617 754 FunFam Chloride channel ClC3 67 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03617 Rops-Chr2 66932400 66938738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03617 6 749 Ion Channels AT5G33280 74.866 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03617 K05016 - gmx:100817901 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03617 2 66932400 66938738 Rops2g03617 2 66932400 66938738 ECH