Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03586 ATGGGGAAGAAAAAGAAGCAAGGAGGAGATGAAGAAAGTGGAAATCAAAGCAAAGTGGGAAATAGCAGCCCCAGAGGATATGACAATGATACTATGGTATTTATATCCATGTCTGAAGAGTTGAAGGATGAGGGGAACAAGCTATTCCAAAAGAGGGACCTTGAAGGAGCTATACAAAAGTATGAGAAAGCCCTCAAATTGCTTCCAAGAAATCATATTGATGTGTCCTATCTGCGGAGTAACATGGCTGCATGTTATATGCAGATGGGGCTCAGTGAATATCCAAGGGCAATTCATGAATGCAATTTGGCTCTTGAAGTAACACCAAAATATAGTAAAGCTCTGTTGAAGAGGGCAAGGTGCTACGAGGGTTTAAACAGGCTGGATTTAGCTCTGAGAGATGTCAGTGCTGTTTTAAAGATGGAGCCGAATAATGTCATGGCATTGGAGATCTCAGAAAAGGTGAAAAATGCACTTGAGGAGAAAGGATTGAGAGTGAATGATACAATAATTGAGTTGCCTTCGGACTATGTTGAACCTTTTAATGCTTTGCCTCCAAAAAAGGTAGTGAAAGAGAAGAAGCCACGTAAGAAGAAGAGCAATAAAGAGGAAGAGAAGGCTCCTGATAACAAAATTCTAGAAAAGCAAGCCGAGGAGAAATTTGAAGAGAGGAAGGCTGAGGACAGTCCTATAGTCGTAGTAGAGAAGAAGGCTGAGGACAGTCCTATAGTCGTAGAGAAGAAGGCCAACAAATCCAAAAAGAAGAAGGCCAAGGAAAAAATTGATGAGAAGAAGGCTGATATTAAGGAAGTTGTACTGGAGAAAAGTAATGGTAGAAGGGAAGATATACCTAAGAAAACAGCAAAACTTATTTTTGGTGAGGATATAAGATGTGCTGAATTGCCTGTCGATTGTAGCCTCTTACAGTTAAGGGAAGTTATTCATGACCGATTCCCAAGCCTAGGATCTGTTCTTGTCAAATACAGGGACCAAGAAGGCGATTTGGTCACGATCACTTCTGATGATGAATTAAGATGGGCTGAAACAGGATCTCATGGTTCTATCCGGCTGTACCTAGTAGAAACTAATCCTAAGCTGGATCCATTTCTTGAGAAACATAAAGTAAAGGAAGCGGAAATTGTTGGAATCAATGATGCACCCAGGAATGGCTATGTGGGAAAAGCAAAGGAAATCATTAGCTCCTCTTGCATTGAGGATTGGATAATTTGGTTTGCCAAACTGTTCAAGAACCATGTTGGGTTTGAATCTGACAGATATTTGGATTTTCACGAACTTGGGATGAAGTTCTATTCTGAGGCATTGGAGGAGACAGTTACAAGTGAAGAAGCACAAGGCCTATTTGACATGGCAGGAGATAAGTTCCAAGAGATGACTGCTCTAGCACTGTTCAACTGGGGAAATGTGCATATGTCTAGGGCAAGGAAGAAAGTATATTTCACAGAAGATTCTTCTAAAGAGCATCTACGTGAACAAATCAAAAGTTCATATGAATGGGCACAGAAAGAATATGCAAAAGCCGGAGAAAAATATGAAGCAGCCATTAAAATTAAGTCTGATTTTTATGAAGGCTTCCTGGCACTGGGGCAGCAGCAGTTTGAGCAAGCAAAACTTTCTTGGTATCATGCACTCAGTAGTAATGTAGATTTAGTAACATGGCCTTCCACTGAGGTTCTTCAGCTTTACAACAAAGCTGAGGATAATATGGAGAAAGGAATGCAGATATGGGAAGAATCAAAAGAGCAGCACTTGAGTAAAACCTCTAACACGAATGATGTTAGATTACATTTGCAGAACATGGGGTTGGATGGACTTTTTGAAAATATATCCTCGGATGAAATTGCTGCACAGGAGGCAAATATGAGGTCTCAAATAAATCTCCTATGGGGTACCATGTTATATGAACGCTCAATTACAGAATTCAAATTAGGGCTACCAATTTGGCATGAATCTCTGGAAGTTGCAGCTGAGAAATTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTAATGTTGAAGAATCACTGTTCAAATGATACTGCAGTAGATGGTCTAGCATTCAAGATCGATGAAATAGTACAGGCATGGAATGAGATGTACAAAGCTAAAAAGTGGCAGAGTGGAGTTCCATCATTTCATTTGGAACCCTTGTTTAGAAGGCGAGTTTCAAAAATTTATCATGCCTTTGAGCTTGCATGA 2220 0.4018 MGKKKKQGGDEESGNQSKVGNSSPRGYDNDTMVFISMSEELKDEGNKLFQKRDLEGAIQKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPKYSKALLKRARCYEGLNRLDLALRDVSAVLKMEPNNVMALEISEKVKNALEEKGLRVNDTIIELPSDYVEPFNALPPKKVVKEKKPRKKKSNKEEEKAPDNKILEKQAEEKFEERKAEDSPIVVVEKKAEDSPIVVEKKANKSKKKKAKEKIDEKKADIKEVVLEKSNGRREDIPKKTAKLIFGEDIRCAELPVDCSLLQLREVIHDRFPSLGSVLVKYRDQEGDLVTITSDDELRWAETGSHGSIRLYLVETNPKLDPFLEKHKVKEAEIVGINDAPRNGYVGKAKEIISSSCIEDWIIWFAKLFKNHVGFESDRYLDFHELGMKFYSEALEETVTSEEAQGLFDMAGDKFQEMTALALFNWGNVHMSRARKKVYFTEDSSKEHLREQIKSSYEWAQKEYAKAGEKYEAAIKIKSDFYEGFLALGQQQFEQAKLSWYHALSSNVDLVTWPSTEVLQLYNKAEDNMEKGMQIWEESKEQHLSKTSNTNDVRLHLQNMGLDGLFENISSDEIAAQEANMRSQINLLWGTMLYERSITEFKLGLPIWHESLEVAAEKFELAGASPTDIAVMLKNHCSNDTAVDGLAFKIDEIVQAWNEMYKAKKWQSGVPSFHLEPLFRRRVSKIYHAFELA* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03586 739 MobiDBLite consensus disorder prediction 188 223 - -
Rops2g03586 739 ProSiteProfiles TPR repeat profile. 112 145 IPR019734 GO:0005515
Rops2g03586 739 Gene3D Tetratricopeptide repeat domain 430 607 IPR011990 GO:0005515
Rops2g03586 739 Gene3D Tetratricopeptide repeat domain 36 165 IPR011990 GO:0005515
Rops2g03586 739 SMART PB1_new 285 362 IPR000270 GO:0005515
Rops2g03586 739 MobiDBLite consensus disorder prediction 197 223 - -
Rops2g03586 739 ProSiteProfiles PB1 domain profile. 285 362 IPR000270 GO:0005515
Rops2g03586 739 Coils Coil 247 274 - -
Rops2g03586 739 Gene3D - 286 362 - -
Rops2g03586 739 ProSiteProfiles TPR repeat profile. 38 71 IPR019734 GO:0005515
Rops2g03586 739 SUPERFAMILY TPR-like 38 546 IPR011990 GO:0005515
Rops2g03586 739 SMART tpr_5 38 71 IPR019734 GO:0005515
Rops2g03586 739 SMART tpr_5 112 145 IPR019734 GO:0005515
Rops2g03586 739 SMART tpr_5 76 111 IPR019734 GO:0005515
Rops2g03586 739 MobiDBLite consensus disorder prediction 13 28 - -
Rops2g03586 739 CDD PB1 289 359 - -
Rops2g03586 739 MobiDBLite consensus disorder prediction 1 28 - -
Rops2g03586 739 PANTHER PROTEIN CLMP1 3 737 IPR044517 -
Rops2g03586 739 Pfam PB1 domain 287 360 IPR000270 GO:0005515
Rops2g03586 739 SUPERFAMILY CAD & PB1 domains 287 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03586 Rops-Chr2 66447733 66453482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03586 27 145 Calmodulin-binding Proteins AT3G25230 32.331 2.87e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03586 2 66447733 66453482 Rops2g03586 2 66447733 66453482 ECH