Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03572 ATGGATTATCCTCTACATCAAATGGTACCGGAACCTGGTTTGTCTAACCCCTGGTGTGGATGGGCTGATCTTTCCAACCTGATGGGGTTGATGCAGGAGTTTGAGCCCCATCTTGGCTGGGTGTGCTGCACAACTCCCATTTATGATACTCTCCCCTTTTATCAGGTTGCTTGTAGGAGAGGGTTCTCCTCTATGTCATTAGTTCTTAGTATAGGATTTCCACTCAGGCAGGTATCGTGTAGTCTGTGGAGAATGGGAAGTAATGGTACTGAAAAGATCCCTTGCAGTAACATCACTGGAAGTTCTGAAACCACTATTGAGATAAAGATTAAAACATTGGATTCACAAACTTATACCCTCAGAGTGGATAAACAGATGCCGGTCCCTGCTCTGAAAGAACAGATTGCTTCAGTAACTGGTGTCCTATCAGAACGGCAGCGCTTAATTTGCCAAGGAAAAGTTCTAAAGGATGATCAACTTCTGTCTGCCTACCATGTTGAAGATGGTCACACCTTGCATCTGGTTGTGAGGCAACCTGATCTACCACCACCTGGAAGTTTGCCCAATCATTCAGTGACTGAACCAAATTCAAGCACAAGCCATGGCCAAAGTAATCAAGTAGCCCCTGGGGTATTTATTGAAACTTTCAATGTACCTGTTCAGGGCGATGGAGTTCCTCCTGAAATCAATAGGATTGTTTCTGCTGTTCTAGGCTCTATCGGACTTCCGAATTTCGCAAGTGGTGGTGAAGGGATTGATGTCAGGGAGCATGACACCCAAGGCTTAGGAAGATCTTCAGGTTCTAGTGGAACATCAAATTCATCTCATCCTCAACCTGAACAAGCTGGCTTGCGGATTTTGTCTGATAGATCACGTAATACCTTTGGGCTTCCAGCAGCTGTTTCTCTAGGATCTTTGCAGCCTCCTGTCATTCCTGATTCTTTGACAACCTTATCCCAATACCTAAGTCATATAAGCCATGAATTTGATACAATTGTCAGAGAAGGGGGGGATGATGTCCAAGCAGCTGAGGTTCATAGGAATGAAGAAATGGGTTCTGTTTCTTCACGTTTGGGTTCAACACCAGAAGGGCTTTCATCACCTGCATCCTTGGCAGAAGTCTTGCTTTCTACCAGACGAATGATTATTGAACAAGCTGGGGAGTGCCTACTTCAACTTGCAAGACAGCTGGAGAATCAAGCAGTTGTAACTGATCCCTCGTTGCGCTCAAGCATTCAGTCTAGGGCATTGAGGACAGGAGTTCTCTTTTATAACCTTGGTGCATTTTTACTTGAGCTTGGTCGCACAACCATGACGTTGCGTTTGGGTCAAACACCGTCTGAAGCTGTAGTTAACGGCGGGCCTGCAGTTTTTATATCACCATCTGGTCCTAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGAGCAAGCTTTGGTGCTGTCCCTGTGGGAGCTACACAGTCTAACTCGAGTTTAGGTAGTGGACTTGGCTCAAGTTTTTTCCCAAGACGTATTGATATACAGATAAGACGAGGTACATCAACAACCACACCTAGTGCTAATCAAGAAGAGCGTGGTGATACACAATCTGCTTCAGTACAAAGAAATCCAGGTGAAAGTTCTGTTGATCAAGCAACCTCTAGGCGTCCAGATGCATCTATTGCTGGGGACCCTGGAGTAAGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCAGGTCCCTTAGGTCGTCCGTCTTCAGAACCATCTGGTAATTCTATAGGGCTTTACTATCCAGTTCTTGGGAGATTTCAACATGTATCGTCTGGGCATGCAAATAGTGAACAGGGATCTCAACCAGCAAGTCAGCATCATGCTGCGCAACAGTCAACTCCTGAGTCCACATTGCAAAGGCAAAGCATGGAAGATTCCGCAAGGAATGGAACCTCATCAACTTCAAACACAAGACAAGAGCCATCAAGTTCTCGTGTAGTAAATATCAATATTATGGCAGCTGGTGGGACCCCAAACAACCAAGAATCTGAGAGACAGATACCAAGCAGTGTACTTCAGTTTTTAAGGGCACTCTTTCCTGGTGGAGAAATTCATGTGGAAGATTCAAGTTTACAAGGAACACCTCCAGGTTCTACCTCAGAGCATGCTGCAACATCAAGGGGTGCTGCCCAAGTTCCTGAAGCAGAACCCAGTGCTAGTGAGGAAGGAATATTTTTGTCAAATATACTCCGGGAGGTCATGCCTGTGATATCTCAACAAGTAGCGTCTGAGAGAAATCCTTCTGATGTTCAAATGGCTCAAAATTTGTCAACCCAGGTTGAAACTGATGCTGGGACATCACGAAGACAGCATGATTCTGAACCAAGCCCTTCTAATCCAAAACGTCAAAAGATGGAGTGA 2403 0.4528 MDYPLHQMVPEPGLSNPWCGWADLSNLMGLMQEFEPHLGWVCCTTPIYDTLPFYQVACRRGFSSMSLVLSIGFPLRQVSCSLWRMGSNGTEKIPCSNITGSSETTIEIKIKTLDSQTYTLRVDKQMPVPALKEQIASVTGVLSERQRLICQGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPPPGSLPNHSVTEPNSSTSHGQSNQVAPGVFIETFNVPVQGDGVPPEINRIVSAVLGSIGLPNFASGGEGIDVREHDTQGLGRSSGSSGTSNSSHPQPEQAGLRILSDRSRNTFGLPAAVSLGSLQPPVIPDSLTTLSQYLSHISHEFDTIVREGGDDVQAAEVHRNEEMGSVSSRLGSTPEGLSSPASLAEVLLSTRRMIIEQAGECLLQLARQLENQAVVTDPSLRSSIQSRALRTGVLFYNLGAFLLELGRTTMTLRLGQTPSEAVVNGGPAVFISPSGPNHIMVQPLPFQPGASFGAVPVGATQSNSSLGSGLGSSFFPRRIDIQIRRGTSTTTPSANQEERGDTQSASVQRNPGESSVDQATSRRPDASIAGDPGVRIVPIRTMVAAVPGPLGRPSSEPSGNSIGLYYPVLGRFQHVSSGHANSEQGSQPASQHHAAQQSTPESTLQRQSMEDSARNGTSSTSNTRQEPSSSRVVNINIMAAGGTPNNQESERQIPSSVLQFLRALFPGGEIHVEDSSLQGTPPGSTSEHAATSRGAAQVPEAEPSASEEGIFLSNILREVMPVISQQVASERNPSDVQMAQNLSTQVETDAGTSRRQHDSEPSPSNPKRQKME* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03572 800 MobiDBLite consensus disorder prediction 754 778 - -
Rops2g03572 800 Pfam Ubiquitin family 108 178 IPR000626 GO:0005515
Rops2g03572 800 MobiDBLite consensus disorder prediction 754 800 - -
Rops2g03572 800 SUPERFAMILY Ubiquitin-like 100 186 IPR029071 -
Rops2g03572 800 MobiDBLite consensus disorder prediction 513 550 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 605 660 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 779 800 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 700 734 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 705 720 - -
Rops2g03572 800 Gene3D - 100 198 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 190 205 - -
Rops2g03572 800 FunFam Large proline-rich protein BAG6 98 191 - -
Rops2g03572 800 PRINTS Ubiquitin signature 137 157 IPR019956 -
Rops2g03572 800 PRINTS Ubiquitin signature 116 136 IPR019956 -
Rops2g03572 800 PRINTS Ubiquitin signature 158 179 IPR019956 -
Rops2g03572 800 ProSiteProfiles Ubiquitin domain profile. 106 181 IPR000626 GO:0005515
Rops2g03572 800 MobiDBLite consensus disorder prediction 249 281 - -
Rops2g03572 800 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 100 799 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 176 205 - -
Rops2g03572 800 SMART ubq_7 106 177 IPR000626 GO:0005515
Rops2g03572 800 MobiDBLite consensus disorder prediction 261 281 - -
Rops2g03572 800 MobiDBLite consensus disorder prediction 513 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03572 Rops-Chr2 66231568 66240573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03572 106 177 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 6.97e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03572 K23390 - gmx:100783070 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03572 2 66231568 66240573 Rops2g03572 2 66231568 66240573 ECH