Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03563 ATGGCGTTTGATCAGAATTTCGTTCCTAAGGATCTGCGTGTTTTAAACGTAGCACCAACGTTGGCAGAGGAGCCTCTTAATTCGCAGGCAACCACCGTCACGACGCCTCCGACTCCAAATTCCGTCACCGACCTTTTCTACACGCCGGCGGTATCCGCCGCCACCGGAACATGGTGCGTTCGCCCCGTCGCTAATCCTGTTACTATTGGGTTTAGCTACGGTTCTCGTTCTGGAAATCGTGTCGCGGCTGGGAATGCTTTGAATTTGGGGAAATGGGTAGGGACTAATGGGTGCAATGATGGTGTAAATATAAATGGTTTTGGATATGGTGCTGTTGGGGGCACAAAAGTGGTTGATGAGGGAGGGGATGATTCGGTTTCAGGGAGAAAAGTGAAGTTTTTGTGCAGTTTTGGTGGGAAGATATTACCAAGGCCAAGTGATGGAATGTTGAGATATGTTGGAGGGCAAACAAGGATAATTAGTGTTAGGAAAGATGTGAGTTTCAATGATTTGGTACAGAAGATGGTAGAAACTTATGGGCAATCTGTGGTTATTAAGTATCAGCTTCCTGAGGAGGATCTTGATGCATTGGTCTCTGTTTCATGCCCTGATGATGTTGAGAATATGATGGAGGAGTATGAAAAATTAGTTGAGAGATCTCCTGATGGTTCTGCTAAATTAAGGGTTTTTCTGTTTCCTGCATCAGAGCTTGAACTTTCTTCTGGTGTGGTTGAGCTTGGTGACTTGCAAGATACAGGGCAGAAATATTTTGATGCTGTGAATGGTGTTACTGATGGGAATGGGATTGGTAGTGGAATCAAGAGGAAGGAGAGTGTTACAAGTGCAGCTTCAACCCAGAATTCTGATTTGAGTGGGATTGAGACTCTTGATAGTTCAATTACTGGTCAAGGGGACTCGGTGTTATCACCTAAAGAGAATATGGCAGCTTCTCCAGACACAAGTGCAAATTTGGTGGTTTCTGAGCCCAGTACAGTAGTTTACTCAGGTGCTTCTGCGGTTTCACTGGGTATGCCAATGGCTAAGACTAATCCAGGTCCAACACCAACTACATATTTTCAGAATGAGGTGGAGTTGGAAAAGCCTGTGCCGGTTACTTTATCACAGCAGCCATTTGGATTGCAACAATCTGGAATTGAAATTCCACCACCTTCACCTTATTTGCAGCCTTTTGTTGATCATTGCCATGGCCAGATGGGGTTCCCAAATACTCAGCTTTTAGGAAATACTAGGCCTGTCTTCACACAACAGCAGTTTCATGATAATACTCCTAGTTTATCATACCATCAGGTCATCCCTGGAGCACAAATAGCAATGACTCCACCATCTTCTCATGTTGGTATAAGACCGAATGTCATTCAACCACAATTGGTGCAACCACAGCAGAATCGTTTGGACCAATACAGTGATGAAAATACATCAGGGGTAAGGATTATCCAGCTTCCTGGTGAACGCAGCTACAACACATACCAGGTTCCAGTGAATCAAGTCCCATCTGTCATAGTTGGAGGTAATTATGGTTGGGTTCAGGTTCCTCCACAAGAGCATGTTGTTTTCTCTGATGGGTCATTACCTCAACAACAAGTAATGATCCCTGAGAAAATCCAAAGAGCTGAGGGCTGTTCTATGTGTCAGAAAAAGCTACCTCATGCCCATTCAGATCCAGTGGTTCCGGTTCCAGATCAGCGTAATAGTGGTGGTGCAGGCCCAGTTTCTGATTGTATCCCAAGTTACCATAGTTTCCCCATGGAGGACAATATAAAAGCTCAAGCAACACATAAGGTGATGCCTATGGTAACTGCACCCTTGAAGGAAGGCATTGTTGAACAAGGGGTTGGGAGACCCAACATCATTAGCAATTTGGAACCTTCTAACGGAGTGCCTTGTACTGACGCTACCCGGCTTTCTCATAATCTTGAGCCTCCTCCACTTGAAGGTGGGAGGGTTTTTATTCAAAAACCAGAAAAATTTGATCATCCCAGGAATTCATTTGTCCAGGAAACGATGGGAAGGACAGGTGGAAAACAGTCTCCTAGAGAGGGGCACATGGGAACAACACCACTGTCTTATGCAGATGATGTTGTCCACCAGCATAATGTGCCAGTTGAAAACTGGGTAAAACAGAATGTGGTTGTAAATAAACCTGTCAACAATGATGTACCTATAGTTGATGGAGCAGCTATACAAACTTCGGAGTGTATGGTTCACGGATCTCCAAAAGAATATAACAATGAGCTTACTGGTGTTATTTCTAAATCTGATGCATTAGATAATTGGATCAGACAGGACCATCTAAAACCTATTGATGGAAGAATGGACACCCTCAAGATACACAATCCTGAAGTTTATGTAAGCAATGATCACTGCTTTCTGCCAGTTAATAAATCCAGTGGGAGTGATAAATTAGATTGCAAAACTCAGCAAGCTGTAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCAGGTCAAAATTGATGGTTGACGCAAATCAAATTATGCCGCCTAGTTCTTCTACGGAAATTTCATATGGGCACAATACCAGACCAGGGAAATACAATGAAGTTGCACAACCCCCTCTTTGGGACATTCCTAGCTCAAATCCTCAATCAAAGATTGGAAACCACTACAAGGATGATGCAGCGTCTTCTCCATCATCATCGTCTGTCAGGTTTGGAGATGTGCAGGATTCTCCAAACTCACTTTGTAGCAATCAGGATCCCTGGAATATACAGCAAGGTACCTTCAATCCAACTGCTAGACCTAGCAAAGCTGCATGGAAGAAGGAAACCTATTTTCCTAAGGATTACTCTGGCGAGAATCCAGGCTACTCTGGGAAACAAAATTTAGAAGCACAATTGGATGCTGGCCTCTACCAGTCATTCAAACAGAATTTTACTTTAGAACATGGTTGGTCTGCTTTAGGCTCAGCAGAAGACCAACAACTTCAAGCTGTTGCTGAAGATGTAGCAGCATCTGTTCTGCACTCAAGCAATCCTTCAAGCCCAAACTCGCATACCAGAGATGTTTCCTGTCGTCAAAACATTGAGGATGGCAATGCTCAAAATAATCTAATAGATGTAATGTGTAGAGATAAAACTCAGGATGTCAAGAGCCAACCTCCAGAAAAGGCAAATTTTGGCTTTCCAGCATTGAGTGTTGGAGGATTGCAGGTTATAAAGAACTGTGATCTTGAAGAGCTCGCAGAATTGGGTTCCGGTACTTTTGGGACTGTATATCATGGGAAATGGAGGGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCCTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCCGTGGCAACAGTAACTGAGTATATGGCTAATGGTTCTCTAAGAAATGCCTTGCAGAAGAATGAGAGGAATCTTGACAAACGCAGGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGCATGGAGTACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCATACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAGTGTAAGACACTGATCTCTGGCGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTGAACGGAAGCAGTAGCCTTGTTTCTGAGAAGGTTGATGTGTTTTCTTTTGGTATTGTGATGTGGGAACTGTTAACCGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGTATAGTGAGCAACACTTTGCGCCCTCCAGTTCCAGAATCTTGTGATTCAGAATGGAGATTACTGATGGAGAGGTGCTGGTCCTCAGAGCCTTCAGAGAGACCTTCCTTCACTGAGATTGCCAATGAATTACGTTCTATGACATCCAAACGACAAAATCAACCCTCTTCCTTGCACAACCAAATCCACAAATGA 4062 0.4407 MAFDQNFVPKDLRVLNVAPTLAEEPLNSQATTVTTPPTPNSVTDLFYTPAVSAATGTWCVRPVANPVTIGFSYGSRSGNRVAAGNALNLGKWVGTNGCNDGVNINGFGYGAVGGTKVVDEGGDDSVSGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRKDVSFNDLVQKMVETYGQSVVIKYQLPEEDLDALVSVSCPDDVENMMEEYEKLVERSPDGSAKLRVFLFPASELELSSGVVELGDLQDTGQKYFDAVNGVTDGNGIGSGIKRKESVTSAASTQNSDLSGIETLDSSITGQGDSVLSPKENMAASPDTSANLVVSEPSTVVYSGASAVSLGMPMAKTNPGPTPTTYFQNEVELEKPVPVTLSQQPFGLQQSGIEIPPPSPYLQPFVDHCHGQMGFPNTQLLGNTRPVFTQQQFHDNTPSLSYHQVIPGAQIAMTPPSSHVGIRPNVIQPQLVQPQQNRLDQYSDENTSGVRIIQLPGERSYNTYQVPVNQVPSVIVGGNYGWVQVPPQEHVVFSDGSLPQQQVMIPEKIQRAEGCSMCQKKLPHAHSDPVVPVPDQRNSGGAGPVSDCIPSYHSFPMEDNIKAQATHKVMPMVTAPLKEGIVEQGVGRPNIISNLEPSNGVPCTDATRLSHNLEPPPLEGGRVFIQKPEKFDHPRNSFVQETMGRTGGKQSPREGHMGTTPLSYADDVVHQHNVPVENWVKQNVVVNKPVNNDVPIVDGAAIQTSECMVHGSPKEYNNELTGVISKSDALDNWIRQDHLKPIDGRMDTLKIHNPEVYVSNDHCFLPVNKSSGSDKLDCKTQQAVEEEVILDNNFGRSKLMVDANQIMPPSSSTEISYGHNTRPGKYNEVAQPPLWDIPSSNPQSKIGNHYKDDAASSPSSSSVRFGDVQDSPNSLCSNQDPWNIQQGTFNPTARPSKAAWKKETYFPKDYSGENPGYSGKQNLEAQLDAGLYQSFKQNFTLEHGWSALGSAEDQQLQAVAEDVAASVLHSSNPSSPNSHTRDVSCRQNIEDGNAQNNLIDVMCRDKTQDVKSQPPEKANFGFPALSVGGLQVIKNCDLEELAELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMANGSLRNALQKNERNLDKRRRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPYRPICKVGDLGLSKVKCKTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSEWRLLMERCWSSEPSERPSFTEIANELRSMTSKRQNQPSSLHNQIHK* 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03563 1353 Pfam PB1 domain 150 233 IPR000270 GO:0005515
Rops2g03563 1353 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1158 1349 - -
Rops2g03563 1353 Pfam Protein tyrosine and serine/threonine kinase 1073 1333 IPR001245 GO:0004672|GO:0006468
Rops2g03563 1353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1195 1207 IPR008271 GO:0004672|GO:0006468
Rops2g03563 1353 SUPERFAMILY CAD & PB1 domains 146 237 - -
Rops2g03563 1353 SMART serkin_6 1070 1336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03563 1353 SMART PB1_new 145 234 IPR000270 GO:0005515
Rops2g03563 1353 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1063 1157 - -
Rops2g03563 1353 SUPERFAMILY Protein kinase-like (PK-like) 1064 1332 IPR011009 -
Rops2g03563 1353 CDD PB1_UP2 134 232 - -
Rops2g03563 1353 ProSitePatterns Protein kinases ATP-binding region signature. 1076 1107 IPR017441 GO:0005524
Rops2g03563 1353 PRINTS Tyrosine kinase catalytic domain signature 1152 1165 IPR001245 GO:0004672|GO:0006468
Rops2g03563 1353 PRINTS Tyrosine kinase catalytic domain signature 1304 1326 IPR001245 GO:0004672|GO:0006468
Rops2g03563 1353 PRINTS Tyrosine kinase catalytic domain signature 1260 1282 IPR001245 GO:0004672|GO:0006468
Rops2g03563 1353 PRINTS Tyrosine kinase catalytic domain signature 1189 1207 IPR001245 GO:0004672|GO:0006468
Rops2g03563 1353 Gene3D Transferase(Phosphotransferase) domain 1 1157 1353 - -
Rops2g03563 1353 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 150 234 - -
Rops2g03563 1353 ProSiteProfiles Protein kinase domain profile. 1070 1337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03563 1353 PANTHER SERINE-THREONINE PROTEIN KINASE 197 1335 - -
Rops2g03563 1353 MobiDBLite consensus disorder prediction 885 925 - -
Rops2g03563 1353 MobiDBLite consensus disorder prediction 838 852 - -
Rops2g03563 1353 Gene3D - 151 233 - -
Rops2g03563 1353 MobiDBLite consensus disorder prediction 838 930 - -
Rops2g03563 1353 MobiDBLite consensus disorder prediction 280 321 - -
Rops2g03563 1353 Gene3D Phosphorylase Kinase; domain 1 1063 1156 - -
Rops2g03563 1353 CDD STKc_MAP3K-like 1076 1333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03563 Rops-Chr2 66098713 66106943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03563 83 600 MAP Kinase Kinase Kinase AT3G46920 39.444 1.79e-89 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Rops2g03563 PK_Tyr_Ser-Thr 3.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03563 - - mtr:11439273 1816.97