Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03544 ATGGCTTCAAATCTCGTTGCTTTCATCTTTGTCATCCTTGTCTTCATCCCTCTGAAATCTCACTCTTTTGCAGATAAACCATCGTGGGTGAAAGCTGGTTATTACTATTCTGGCAGTGAAGTATCTGCTTCAGAGATAAAAGCCACGCTTTTCACTCACCTCTTGTGTTCTTTTGCTTTTATAAACACCACCAACTACAAGATCTTTATCAACTCTTCAGAGGAGCACAAGTTCGCCACCTTCACTAACACAGTAAAGCTCCAAAACCCATCTGTTTCAACTCTTCTATCCATCTGGGGTGGTAGAGAGGACTCTTCAGTTTTCACCTCTATGCTAAACCAATCTTCCTATAGGAAATCTTTCATTGATTCTACCATCAGAGCAGCAAGGCAACATGGCTTTCAGGGCATAGACCTTTATGGGGTATGGCCAAGGCAGGGTAAGGACCTTGCCAATTTTGGAACCCTTTTGAAGGAGTGGCGAGCTACAATAACCTCTGAGGCAAGAAACTCTAGCAAGTCAGAGTTAATATTGGTGATGGCAGGTTACTACCTTAAAGCTTCGGACTCCTTAAATTACCCCTTTGAATCAATGCAGATGAACTTGGATTGGGTGCATTTTGTGGCATATGATTACTACCTTCCTAGAAAGGACAACGTTACGGGTTTTCATGCGGCTTTATATGGTCCATCTGATTGGGATAACACTGACTATGGTATCAGAGAGTGGAGGAGAAGGGGATTTTCATCTAGCAAGTTGGTAATTGGCTTGCCTTATCATGGATATGCATGGACACTTGTGAACCCAGGAAACAAAGGCGTGGGAACACCAGCATCAGGACCTGCCATTACAATGGATGGTTCCATGGGTTATAAATTGATAAAGAGTTACATTAGAAGCTTTGGAGATGGAGTTGTTTCAAATTATAATGCTACTTTTGTGGTGAATGACTTCACAGTTGCATCCACCACTTGGGTTAATTTTGACGATGTGGAAGTAATAAGGGAAAAAGTTTCTTATGCAAAGAAAAATGGACTACTTGGTTATAACGTGTTCCAATTGGCCAATGATGAGAATTGGGTCCTTTCAAGGGCAGCTCAAGAAGTAGATGTAGATCATCATAGGAGGAGGTTGCTGATAATTGTTCTGCTTACAACTCTGACACTTGCACTTCTATTGGGAATAGTATTCTGCTTCTACCACCGAGGAATAGTAGCCACTTTTACAAGAATATTATATAAACTAAGAAGTTCATCAGAAGCTGAAAATGATCTCGGTGGAAATGCTTCTGATCTGATAGTATTCAGTTACCTCACAATTAAAGTGGCAACAGATAACTTCTCAAAAGATAATAAGCTTGGCGAGGGGGGATTTGGCTCGGTGTACAAGGGAAAATTACGGAAGGGACAGGAAATAGCAGTAAAAAGACTATCAGAAACATCAAATCAAGGCCTTGAAGAATTCAAAAATGAGATCACGCTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTCTAATCTATGAATACCTGCCAAACAAAAGCTTAGATCATTTCCTATTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGCAAGCGTGTTAATATCATTGAAGGAGTTACTCAAGGCCTTCTTTATCTCCAAGAGTATTCAAATTATACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTCTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGTATGGCTAGAATTTTCGGGAAGTATGAACTAGAAGCAAACACAAGCAGGATTGTGGGAACATATGGATATGTACCTCCTGAGTATGTGAGAAAAGGCATATACTCAACGAAGTACGACGTTTACAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCATGTTATTACGGCGAGCATGAAAATATGAACCTTTTGGAATATGTGTATGAGCTGTGGGAGCAAGGCAGAGGTGTGGAGTTTTTAGACCCATCATTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGCAGGTGGCTCTGTTGTGCGTCCAAGAGAACCCTGCTGATAGACCTTCCATGTTAGAAGTTTATTCACTGCTCAAGAATGAAGCCGCAGCTATTGGTACTCCCAAAATGCCTGCATTTTCGATTAAAAAACAAAAAGATGAGGAAGAAACATCTCACTGCAGGATCAATTTTTCTTCAATCAATGATGTTACAATTTCTCAACTGGTACCAAGATGA 2298 0.4008 MASNLVAFIFVILVFIPLKSHSFADKPSWVKAGYYYSGSEVSASEIKATLFTHLLCSFAFINTTNYKIFINSSEEHKFATFTNTVKLQNPSVSTLLSIWGGREDSSVFTSMLNQSSYRKSFIDSTIRAARQHGFQGIDLYGVWPRQGKDLANFGTLLKEWRATITSEARNSSKSELILVMAGYYLKASDSLNYPFESMQMNLDWVHFVAYDYYLPRKDNVTGFHAALYGPSDWDNTDYGIREWRRRGFSSSKLVIGLPYHGYAWTLVNPGNKGVGTPASGPAITMDGSMGYKLIKSYIRSFGDGVVSNYNATFVVNDFTVASTTWVNFDDVEVIREKVSYAKKNGLLGYNVFQLANDENWVLSRAAQEVDVDHHRRRLLIIVLLTTLTLALLLGIVFCFYHRGIVATFTRILYKLRSSSEAENDLGGNASDLIVFSYLTIKVATDNFSKDNKLGEGGFGSVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPRKSILLDWSKRVNIIEGVTQGLLYLQEYSNYTIIHRDLKASNVLLDHEMNPKISDFGMARIFGKYELEANTSRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGEHENMNLLEYVYELWEQGRGVEFLDPSLDDTTSPCKIMRCMQVALLCVQENPADRPSMLEVYSLLKNEAAAIGTPKMPAFSIKKQKDEEETSHCRINFSSINDVTISQLVPR* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03544 765 ProSiteProfiles Protein kinase domain profile. 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03544 765 Gene3D - 259 328 IPR029070 -
Rops2g03544 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Rops2g03544 765 SUPERFAMILY (Trans)glycosidases 32 358 IPR017853 -
Rops2g03544 765 Gene3D Phosphorylase Kinase; domain 1 409 522 - -
Rops2g03544 765 Pfam Glycosyl hydrolases family 18 34 357 IPR001223 GO:0005975
Rops2g03544 765 SUPERFAMILY Chitinase insertion domain 261 328 IPR029070 -
Rops2g03544 765 Gene3D Transferase(Phosphotransferase) domain 1 523 730 - -
Rops2g03544 765 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 373 IPR001223 GO:0005975
Rops2g03544 765 SMART 2g34 29 357 IPR011583 GO:0008061
Rops2g03544 765 SMART serkin_6 447 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03544 765 CDD GH18_plant_chitinase_class_V 27 363 - -
Rops2g03544 765 FunFam Uncharacterized protein 523 728 - -
Rops2g03544 765 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 371 761 - -
Rops2g03544 765 Gene3D Glycosidases 44 358 - -
Rops2g03544 765 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
Rops2g03544 765 FunFam Uncharacterized protein 423 522 - -
Rops2g03544 765 CDD STKc_IRAK 453 720 - -
Rops2g03544 765 SUPERFAMILY Protein kinase-like (PK-like) 431 736 IPR011009 -
Rops2g03544 765 Pfam Protein tyrosine and serine/threonine kinase 449 717 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03544 Rops-Chr2 65799592 65803749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03544 435 765 Receptor kinase-like Gene Family AT4G11530 52.226 1.41e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03544 Glyco_hydro_18 3.4e-54 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03544 - - aprc:113847882 1275.38