Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03542 ATGCACACAATATTCTTCTTATTTTCTGGAATAACATATGCATCATTTCCTTTGCAACACCATCCTTCAGCTCATGATGTAGGTGGAGGTCATCATAAGAGGAGGTTGCTGATAATTGTTTTGCTTACAACTCTGACACTCACACTTCTATTGGGAATAGTATTCTGCTTCTACCACCGAGGAACAGTATCCACTTTTACAAGAATATTATATAAACTAAGAAGTTCATCAGAAGCTGAAAAAGATATCAATGAAAATGCTTCAGATCTGACAGTATTCAGTTATCTCACAATTAAAGTGGCAACAGATAAATTCTCAAAAGATAATAAGCTTGGAGAGGGGGGATTTGGCACAGTATACAAGGGGACATTACGGAAGGGACAGGAAATAGCTGTGAAAAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTCTGGTCTATGAATACCTACCAAACAAAAGCTTAGATCATTTCCTCTTTGATCCAAGGAAATCAATTCTTTTAGACTGGACCAAGCGTGTCAATATCATTGAAGGAGTTACTCAAGGCCTTCTGTATCTCCAAGAATACTCAAATTATACTATAATCCACCGAGATCTTAAAGCAAGTAATGTTCTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGTATGGCTAGAAATTTCAGGAAATGTGAACTTGAGGCAAACACAAGCAGGATCGTGGGAACATATGGGTATGTACCTCCTGAGTATGTGAGAAGAGGCATATACTCAACAAAGTATGACGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCATGTTATTATGGCTTGCATGAAAATATGAACCTTTTGGAATATGCATATGAGCTGTGGAAGGAAGACAGAGGTGTGGAGTTTGTCGACCCCTCTTTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGCAGGTGGCCCTGTTGTGGGTTCAAGACAACTCTGCTGATAGACCTTCCATGTTAGAAGTTGATTCACTGCTGAAGAATGAAGCTGCAGTTATTGGTACTCCCAAAATGCCAGCTTTTTCAATTAAAAAACATGAAGATGAGGAAGAAACATCTCACCGCAGGATCAAACTTTCTTCAATCAATGATGTTACGATTTCTCAACTGTCACCAAGATGA 1185 0.3848 MHTIFFLFSGITYASFPLQHHPSAHDVGGGHHKRRLLIIVLLTTLTLTLLLGIVFCFYHRGTVSTFTRILYKLRSSSEAEKDINENASDLTVFSYLTIKVATDKFSKDNKLGEGGFGTVYKGTLRKGQEIAVKRLLGYCTKRDEKILVYEYLPNKSLDHFLFDPRKSILLDWTKRVNIIEGVTQGLLYLQEYSNYTIIHRDLKASNVLLDHEMNPKISDFGMARNFRKCELEANTSRIVGTYGYVPPEYVRRGIYSTKYDVYSFGVLLLQIISGKRTSCYYGLHENMNLLEYAYELWKEDRGVEFVDPSLDDTTSPCKIMRCMQVALLWVQDNSADRPSMLEVDSLLKNEAAVIGTPKMPAFSIKKHEDEEETSHRRIKLSSINDVTISQLSPR* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03542 394 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 135 - -
Rops2g03542 394 Gene3D Phosphorylase Kinase; domain 1 75 136 - -
Rops2g03542 394 SMART serkin_6 105 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03542 394 Pfam Protein tyrosine and serine/threonine kinase 133 291 IPR001245 GO:0004672|GO:0006468
Rops2g03542 394 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Rops2g03542 394 Pfam Domain of unknown function (DUF3403) 349 394 IPR021820 GO:0004674
Rops2g03542 394 FunFam Uncharacterized protein 152 356 - -
Rops2g03542 394 Gene3D Transferase(Phosphotransferase) domain 1 152 356 - -
Rops2g03542 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Rops2g03542 394 ProSiteProfiles Protein kinase domain profile. 55 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03542 394 SUPERFAMILY Protein kinase-like (PK-like) 88 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03542 Rops-Chr2 65778151 65780882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03542 93 394 Receptor kinase-like Gene Family AT4G11480 44.575 9.03e-101 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03542 PK_Tyr_Ser-Thr 2.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03542 - - aprc:113847882 608.601