Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03541 ATGGCTTCAAATCTTATTGCTTTCTTCCTTGTCGTTCTTGTCTTTCTCCCCGTCAAATCTCAGTCTTTTGCAGAGACACCTTCGTGGGTGAAAGCTGGTTATTACTATTCTGGCAGTGAAATATCTGCTTCAGACATAGAAGCCACGCTTTTCAATCACCTCTTATGCGCTTTTGCTTTTATAAACTCCACCAACTACAAGATCTTTATCAACTCTTCGGAGGAGCACAAGTTCGCCACCTTCACTAACACAGTAAAGCTCCAAAACCCATCTGTTTCAACTCTTCTATCCATCTGGGGTGGTAGAGAGGACTCTTCAGTTTTCACCTCTATGCTAAACCAATCTTCCTATAGGAAATCTTTCATTGATTCTACCATCAGAGCAGCAAGGCAACATGGCTTCCAGGGCATAGACCTTAATGGGGTATGGCCAAGGCAGGGTAAGGACCTTGCCAATTTTGGAACCCTTTTGAAGGAGTGGCGAGCTACAATAACCTCTGAGGCAAGAAACTCTAGCAAGTCAGAGTTAATATTGGTGATGGCAGGTTACTACCTTAAAGCTTCGGACTCCTTAAATTACCCCTTTGAATCAATGCAGATGAACTTGGATTGGGTGCATTTTGTGGCATATGATTACTACCTTCCTAGAAAGGACAACGTTACGGGTTTTCATGCGGCTTTATATGGTCCATCTGATTGGGATAACACTGACTATGGTATCAGAGAGTGGAGGAGAAGGGGATTTTCATCTAGCAAGTTGGTAATTGGCTTGCCTTATCATGGATATGCATGGACACTTGTGAACCCCGGAAACAAAGGCGTGGGAACGCCAGCATCAGGACCTGCCATTACAATGGATGGTTCCATGGGTTATAAATTGATAAAGAGTTACATTAGAAGCTTTGGAGATGGAGTTGTTTCAAAATATAATGCTACTTTTGTGGTGAATGAATTCACAGTTGCATCCACCACTTGGGTTAATTTTGACGATGTGGAAGTAATAAGGGAAAAAGTTTCTTATGCAAAGAAAAATGGACTACCTGGTTATAACGTGTTCCAATTGGCCAATGATGAGAATTGGGTCCTTTCAAGGGCAGCTCAAGAAGTAGATGAAGATCATCATAAGAGGAGGTTGCTGATAATTGTTCTGCCCACAACTCTGACCCTCGCACTTCTATTGGGAATAGCATTCTGCTTCTACCACCAAGGCACGGCGGCCACTTTTACAAGAATATTATATAAACTAAGAAGTTCATCAGAAGCTGATAAAGATCTCGACGGAAATGCTTCTGATCTGATAGTATTCAGTTATCTCACCATTAAAGTGGCTACATATAACTTCTCAAAAGATAATAAGCTTGGAGAGGGGGGATTTGGCACAGTATACAAGGGGAAATTACGGAAGGGACAGGAAATAGCTGTAAAAAGACTCTCAGAAACCTCAAATCAAGGCCTTGAAGAATTCAAAAATGAGATCTCGCTTACTGCTAGACTTCAACATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAGAAAGGGATGAGAAGATTCTGATCTATGAATACCTACCAAACAAAAGCTTAGATCATTTCCTCTTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGCAAGCGTGTTAATATCATTGAAGGAGTTACTCAAGGCCTTCTGTATCTCCAAGAATACTCAAATTATACTATAATCCACCGTGATCTTAAAGCAAGTAATGTTCTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGTATGGCTAGAATTTTCAGGAAATATGAATTAGAAGCAAACACAAGTAGGATTGTGGGAACTTATGGGTATGTACCTCCTGAGTACGTGAGAAGAGGCATATACTCAACAAAGTATGACGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCATGTTATTATGGCTTGCATGAAAATATGAACCTTTTGGAATATGCATATGAGCTGTGGATGGAAGACAGAGGTTTGGAGTTTGTTGACCCGTCATTGGGTGATACAACATCACCATGTAAAATCATGAGATGCATGCAGGTGGCCTTGTTGTGTGTTCAAGACAACTCTGCTGATAGACCTTCCATGTTAGAAGTTGATTCACTGCTCAAGAATGAAGCTGCAGCTATTGCTACTCCCAAAATGCCCGCTTTTTCAATTAAAAAACATGAAGACGAGGAAGAAAAATCTCACTGCAGGATCAAACTTTCTTCAATCAATGATGTTACGATTTCTGAACTGGCACCAAGATGA 2298 0.4056 MASNLIAFFLVVLVFLPVKSQSFAETPSWVKAGYYYSGSEISASDIEATLFNHLLCAFAFINSTNYKIFINSSEEHKFATFTNTVKLQNPSVSTLLSIWGGREDSSVFTSMLNQSSYRKSFIDSTIRAARQHGFQGIDLNGVWPRQGKDLANFGTLLKEWRATITSEARNSSKSELILVMAGYYLKASDSLNYPFESMQMNLDWVHFVAYDYYLPRKDNVTGFHAALYGPSDWDNTDYGIREWRRRGFSSSKLVIGLPYHGYAWTLVNPGNKGVGTPASGPAITMDGSMGYKLIKSYIRSFGDGVVSKYNATFVVNEFTVASTTWVNFDDVEVIREKVSYAKKNGLPGYNVFQLANDENWVLSRAAQEVDEDHHKRRLLIIVLPTTLTLALLLGIAFCFYHQGTAATFTRILYKLRSSSEADKDLDGNASDLIVFSYLTIKVATYNFSKDNKLGEGGFGTVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEISLTARLQHVNLVRLLGYCTERDEKILIYEYLPNKSLDHFLFDPRKSILLDWSKRVNIIEGVTQGLLYLQEYSNYTIIHRDLKASNVLLDHEMNPKISDFGMARIFRKYELEANTSRIVGTYGYVPPEYVRRGIYSTKYDVYSFGVLLLQIISGKRTSCYYGLHENMNLLEYAYELWMEDRGLEFVDPSLGDTTSPCKIMRCMQVALLCVQDNSADRPSMLEVDSLLKNEAAAIATPKMPAFSIKKHEDEEEKSHCRIKLSSINDVTISELAPR* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03541 765 SUPERFAMILY (Trans)glycosidases 29 369 IPR017853 -
Rops2g03541 765 Pfam Glycosyl hydrolases family 18 34 357 IPR001223 GO:0005975
Rops2g03541 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Rops2g03541 765 Pfam Protein kinase domain 448 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03541 765 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 373 IPR001223 GO:0005975
Rops2g03541 765 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 343 763 - -
Rops2g03541 765 Gene3D Transferase(Phosphotransferase) domain 1 523 732 - -
Rops2g03541 765 FunFam Uncharacterized protein 422 522 - -
Rops2g03541 765 CDD GH18_plant_chitinase_class_V 27 363 - -
Rops2g03541 765 Gene3D Phosphorylase Kinase; domain 1 409 522 - -
Rops2g03541 765 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
Rops2g03541 765 SUPERFAMILY Protein kinase-like (PK-like) 431 736 IPR011009 -
Rops2g03541 765 SUPERFAMILY Chitinase insertion domain 261 328 IPR029070 -
Rops2g03541 765 Gene3D - 259 328 IPR029070 -
Rops2g03541 765 FunFam Uncharacterized protein 523 727 - -
Rops2g03541 765 CDD STKc_IRAK 453 720 - -
Rops2g03541 765 SMART serkin_6 447 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03541 765 ProSiteProfiles Protein kinase domain profile. 447 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03541 765 Gene3D Glycosidases 44 358 - -
Rops2g03541 765 SMART 2g34 29 357 IPR011583 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03541 Rops-Chr2 65750042 65754283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03541 435 765 Receptor kinase-like Gene Family AT4G11530 52.819 1.08e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03541 Glyco_hydro_18 2.3e-54 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03541 - - aprc:113847882 1271.91