Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03538 ATGCAGGGTCTTCTTTATCTTCAAGAATATTCAAGATTTACCATAATTCATAGAGATTTGAAAGCTAGCAATATTTTATTAGATCATGAGATGAGGCCAAAGATATCAGACTTTGGGATAGCAAGAATATTCACAAAAGATGAACAAGAAGCAAACACTAGCAAGATTGTGGGAACATGTGGTTATGTTCCACCTGAATACGTTAAACGAGGTGTGTATTCCACTAAATTCGATGTCTATAGTTTTGGGGTCCTACTTCTACAAATTATAAGTGGCAAAAAGACAAGTGGCTTTTATGGAGACGAAGATTTAAAGCTTTTGGACTATGCTTATGAGTTATGGAAAGAAGGGAGGGGTATGGAGTTCGTGGATCTTTCACTTGATGACACATCTACAACGTGCAAACTAATGAAATGCATGCAAATTGCTTTGTTATGCGTCCAAGAACATGCAAATGAAAGGCCTTCCATGCTAGAAGTTTCTTCAATGTTGAGAAACGAAGATAACTCTCTAGCCATCCCCAAAAAACCTGCATTTTCAAAAGTGAAAGATGAGGAAGAAACAAATGAGTGTCAACCCCTAGAAATTGTTTCAGTCAATGATACAACAATCACTGAAACGGTGGGCAGATAG 633 0.3728 MQGLLYLQEYSRFTIIHRDLKASNILLDHEMRPKISDFGIARIFTKDEQEANTSKIVGTCGYVPPEYVKRGVYSTKFDVYSFGVLLLQIISGKKTSGFYGDEDLKLLDYAYELWKEGRGMEFVDLSLDDTSTTCKLMKCMQIALLCVQEHANERPSMLEVSSMLRNEDNSLAIPKKPAFSKVKDEEETNECQPLEIVSVNDTTITETVGR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03538 210 SUPERFAMILY Protein kinase-like (PK-like) 2 190 IPR011009 -
Rops2g03538 210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 15 27 IPR008271 GO:0004672|GO:0006468
Rops2g03538 210 FunFam Os07g0541700 protein 1 59 - -
Rops2g03538 210 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03538 210 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03538 210 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 207 - -
Rops2g03538 210 Gene3D Transferase(Phosphotransferase) domain 1 1 187 - -
Rops2g03538 210 Pfam Protein kinase domain 2 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03538 Rops-Chr2 65718638 65719482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03538 2 210 Receptor kinase-like Gene Family AT4G23280 46.047 1.30e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03538 Pkinase 2.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03538 - - vun:114175226 332.028