Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03537 ATGTTGTCCAGAATCGCCCTTGTCCTCTCCTTTCACGTTTTCATCTATATTCTGAAGTTCCAATCCGCAGAAGCTGAATCATGGTTCAGAATTGGTTACTGGTATAGCAGCAGTGGATTTCCAGTATCTGATATCAACTCTGCCCTCTATACTCACCTGATATGCGCTTTTGCTGATGTTAACACTTCATCCTTTGAGCTCTCTGTCTCCTCATCAAATGAGCAACGATTCTCTACGTTCACAAACACTGTCAGACTCAAGAACCCATCCATCACTACCCTTCTTTCCACTGGTGGAGACGAAAATAGTGATGTCATCCAATCCATGATGAACAATGCTTCTTCAAGGAAACCCTTCATTCAATCTTCAATAAGAATGGTCAGACTTTATGGATTTCAAGGCTTGGACTTGTACTGGCCTACCATTAAGACTACCTCTGATGTGAACAACCTGGGAAAGTTTTTCCAAGAGTGGAGAGCTGCTGCAAAATCTGAGGTGGAAACAAACTCTACACTTCAAGAATTGATCTTGACAGCAGTTGTTGAAGCTTCACCTGATTTGGATTATTGGTCCTACCCTGTGGAGTCAATGAGAAGTAACTTGAATTGGATACATGTTAATGGATATGATTACCTTACACCAGTGGATCAAAACTTCACTGCTGCACCTTCAGCTTTATATGACCCTGCAAGTGATCTCAACACGGACTATAGTATCAAGGCATGGATTGAGAACGGGTTACCAGCAAACAAGTTGGTTTTGGGTTTGCCTTTCTACGGATACGCATGGAAACTCCAAAACCCCAATAACAACGCAATAGGTGCACCGGCAATAGGTCCAGTAGATGGTTACGATGGTGGGTCAATAAGTTATAAGGACATAAAAATTAATATTCAGCAAAATGGGGCTGGAGTGCTGTACAATGACACTTATGTAACAAATTACTGCTCATTTGGATCAACTTGGATTGGCTTTGACGATGTCGAGGTTGTCCAGAAGAAGGTGTCATATGTGAGGGAAAAGCAGCTACTCGGTTACTATGTGTGGCATGTTTCCGATGATGACGACAATTTTACACTTGGTAGCGCAGCAGGGATGGTTAACGCCACAAAAAATTCTCAGTCTGAAGTGAATGAAAAAGTTGCCGGACCTTTCCATGGAGACCTGCCAGATTTACAAGTCTATAGATTTATTGACATTGACGTGGCTACAGATAAATTTTCATATGAAAATAAGCTTGGACAGGGTGGTTATGGTCCTGTTTACAAGGGCATCCTAATTAATGGTCAGGAAATAGCCGTAAAAAAATTATCAATATCTTCTACACAAGGATTTGAGGAATTCAAAAATGAGGTAACACTTACCGCAAGGCTACAACATGTGAATCTTGTCCGGCTATTGGGTTTCTGCATTGAAAAAGGGGAGCAGATGCTGGTGTATGAATACATGGCAAATAAAAGCTTGGATTTCTACCTCTTTGGTTTGATATCTCTGCAGCTTGAAACTCTATATATGCTTGAATGA 1524 0.4121 MLSRIALVLSFHVFIYILKFQSAEAESWFRIGYWYSSSGFPVSDINSALYTHLICAFADVNTSSFELSVSSSNEQRFSTFTNTVRLKNPSITTLLSTGGDENSDVIQSMMNNASSRKPFIQSSIRMVRLYGFQGLDLYWPTIKTTSDVNNLGKFFQEWRAAAKSEVETNSTLQELILTAVVEASPDLDYWSYPVESMRSNLNWIHVNGYDYLTPVDQNFTAAPSALYDPASDLNTDYSIKAWIENGLPANKLVLGLPFYGYAWKLQNPNNNAIGAPAIGPVDGYDGGSISYKDIKINIQQNGAGVLYNDTYVTNYCSFGSTWIGFDDVEVVQKKVSYVREKQLLGYYVWHVSDDDDNFTLGSAAGMVNATKNSQSEVNEKVAGPFHGDLPDLQVYRFIDIDVATDKFSYENKLGQGGYGPVYKGILINGQEIAVKKLSISSTQGFEEFKNEVTLTARLQHVNLVRLLGFCIEKGEQMLVYEYMANKSLDFYLFGLISLQLETLYMLE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03537 507 PANTHER CHITINASE 32 367 - -
Rops2g03537 507 SUPERFAMILY (Trans)glycosidases 29 358 IPR017853 -
Rops2g03537 507 FunFam Chitotriosidase-1 258 325 - -
Rops2g03537 507 Pfam Glycosyl hydrolases family 18 31 354 IPR001223 GO:0005975
Rops2g03537 507 SUPERFAMILY Chitinase insertion domain 259 325 IPR029070 -
Rops2g03537 507 SMART 2g34 29 354 IPR011583 GO:0008061
Rops2g03537 507 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 369 482 - -
Rops2g03537 507 Gene3D Phosphorylase Kinase; domain 1 366 482 - -
Rops2g03537 507 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 377 IPR001223 GO:0005975
Rops2g03537 507 Gene3D Glycosidases 44 354 - -
Rops2g03537 507 Pfam Protein tyrosine and serine/threonine kinase 409 492 IPR001245 GO:0004672|GO:0006468
Rops2g03537 507 Gene3D - 258 325 IPR029070 -
Rops2g03537 507 SUPERFAMILY Protein kinase-like (PK-like) 390 496 IPR011009 -
Rops2g03537 507 ProSiteProfiles Protein kinase domain profile. 407 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03537 Rops-Chr2 65712039 65717913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03537 5 379 Glycoside Hydrolase AT4G19810 40.633 4.63e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03537 Glyco_hydro_18 1.8e-65 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03537 - - vun:114175226 640.188